Protein

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Genbank accession
UPT53904.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNLPEIKQYRFDVSGGTTENLVPRELIPASDERNAKIVVPRHAPFFIESVNVYRAGHTIPLNLGEHYDFVSIDHELSEYCGNRVSWVIRKLKDDLPDLEITYQTLGTVPVLTETTKYWYEAAALDQRPVWFDQLLNKPRHFIPMLHGHDLAKGFFNFSRIIEIYEKRYETMFSEDAMIPYRDWFVGQLNNLKTYVEPYRLLLERYTDNHIDNKDDPHGTRSKDIPGLDNLDSVKTADRQQILDGLSSKHRVVSGQAKERMQAEGPRKVDHLPNIFLGENKQVTGTVVGEDLPVPVTEISVGIKDILMSVYVDRTGVGRGEQMFLGKDGYQVSRIVNPNPISAHRNPEKNIWYNTHRSPGYDILIAGGNADARIGYRKSDKRWLLIMDRPQITDHDQQPTHTVTISGDMSDVLNNFREYRLVHTEGAVHLVRTVDHRLKPTVIWKTIKYDKVAGTATAVTEYTFKYNTINDNTAYNERGRVVMFHRGFNAGKYSNGDLVFSDPVDLISEDNQVLLLPTVFKGKLYVEFLLPETFSYKGEQRRYVHSHMAEMNMNHSTKVVTLTWTDTRARPYIVTERLFSDNPEANNYFEQVAVPFPFELTSRRASLVSMSQEGYFGFGFKECGCAEMFSIRLTPGAYTLNEKGRLWHLADTGEFNVTRIGGSSPTVYDRLDAGHIIPMNPYMGVWAESNERHRYGLVKGIHSENGMGFFYKNLYGGVNDLTVAGVKVKTSLPLDNIDYVHDLPPYGWIGTCLDVSERESEFVWSVGGSDAPTSHIPNQVGFGGGNYKVINYVEATDAFLTSMGVNLSGHWTMVLGARYGLPDLIYNTYPEGGQVKTKVLIFRLNANSLTRIDGLHNGTPVSRLSAGDKATVLHQRTLTHTTPAYIKRTKVNKPEPTLNTNVINVLVGDSGRTTIMVCPNNRFGNDSHHTTYPITLVINQSDSSVVVFDEERFDGCIGLSPDFGWVKTTFAEQTKFGGMINAGVQLNTGYQVRPSYIPAASGPVGMFNIIPENVHQLYFPVPMVALRGDTLDRSEMLVYNTKQLINGASAVYDIYLVQGPNGLYLEAGNAKQLDDGYSVEVTQAGVKLI
Physico‐chemical
properties
protein length:1088 AA
molecular weight: 122539,07980 Da
isoelectric point:6,17740
aromaticity:0,10202
hydropathy:-0,36195

Domains

Domains [InterPro]
DC_0943
STR
148–473
DC_0943
UPT53904.1
1 1088
Architecture
STR
STR 148-473 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPT53904.1
1 1088
Domain Start End Length (AA) Confidence
N-terminal 1 293 293 0,9910
Central domain 294 507 215 0,4250
C-terminal 508 1088 580 0,5647
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-293
Central
294-507
C-terminal
508-1088

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phiKT1019
[NCBI] 		2863680 Viruses >
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPT53904.1 [NCBI]
Genbank nucleotide accession
MZ622713 [NCBI]
CDS location
range 73732 -> 76998
strand +
CDS
ATGAACCTCCCCGAGATTAAACAATATCGGTTTGATGTATCAGGTGGAACGACTGAAAACCTCGTACCTCGCGAACTGATTCCTGCCAGTGACGAACGTAATGCAAAGATCGTGGTCCCTAGACACGCACCTTTCTTTATTGAGTCAGTAAACGTGTACCGAGCAGGTCACACTATCCCATTAAACCTTGGCGAACATTACGACTTCGTAAGTATCGACCATGAACTATCTGAGTACTGTGGTAACCGTGTCTCTTGGGTTATTCGTAAATTAAAAGACGACTTACCAGACTTAGAGATCACTTACCAAACTCTAGGTACGGTGCCGGTATTAACTGAGACCACTAAATACTGGTATGAAGCAGCAGCTCTAGACCAACGCCCAGTTTGGTTTGACCAACTACTGAATAAGCCACGTCATTTCATTCCGATGTTACACGGACATGACTTAGCCAAAGGTTTCTTTAACTTCAGTCGTATTATCGAGATCTACGAGAAGCGTTACGAAACTATGTTTAGTGAAGACGCTATGATTCCTTACCGTGATTGGTTTGTTGGTCAGCTCAATAACCTAAAGACTTACGTGGAACCTTACCGTCTACTTTTAGAGCGCTATACTGACAACCACATCGATAATAAAGACGACCCTCACGGTACACGATCAAAGGACATCCCGGGTCTGGATAACCTTGATAGTGTTAAGACCGCCGATCGTCAACAAATCTTAGATGGTCTAAGTTCTAAACATCGTGTGGTCAGTGGTCAAGCAAAAGAAAGAATGCAAGCCGAGGGCCCTCGTAAAGTCGATCACTTACCTAACATTTTCCTAGGGGAAAATAAACAAGTGACTGGTACGGTTGTAGGTGAAGACTTACCAGTTCCTGTTACTGAGATTTCAGTAGGCATTAAAGACATACTGATGAGTGTTTACGTAGACCGTACTGGGGTGGGTCGTGGTGAACAGATGTTCTTAGGTAAAGACGGTTATCAAGTTAGTCGTATTGTGAACCCTAACCCGATTAGTGCTCACCGTAATCCTGAGAAAAACATCTGGTATAACACCCATCGCTCTCCGGGATACGACATCCTAATCGCCGGTGGTAATGCTGATGCCCGAATCGGTTACCGTAAAAGTGATAAGCGTTGGTTACTTATTATGGACCGACCTCAAATCACTGACCATGATCAACAACCTACTCATACGGTGACCATCTCTGGTGACATGAGTGATGTACTGAACAACTTCCGTGAGTATCGTTTGGTACACACCGAAGGCGCTGTGCATCTGGTGCGTACGGTAGATCATCGTTTGAAACCAACGGTCATTTGGAAAACCATCAAGTACGATAAAGTAGCGGGCACTGCGACAGCGGTGACTGAATATACATTTAAGTATAACACCATCAACGATAATACGGCGTATAACGAACGTGGTCGCGTGGTGATGTTCCACCGTGGTTTTAATGCCGGTAAGTATTCCAACGGTGACTTGGTGTTCTCAGACCCAGTAGATTTGATCAGTGAAGACAACCAAGTGTTATTACTTCCTACTGTGTTTAAGGGTAAACTTTACGTAGAGTTCTTGTTACCGGAAACCTTCAGTTACAAAGGTGAACAAAGACGTTATGTCCACTCACACATGGCTGAGATGAACATGAACCACTCTACCAAGGTAGTCACCCTAACTTGGACGGATACCCGAGCTCGACCATACATCGTAACTGAGCGTTTGTTCTCTGACAATCCGGAAGCAAACAACTACTTCGAACAAGTAGCGGTTCCTTTCCCATTCGAATTAACCAGCCGTCGTGCTTCATTAGTAAGCATGAGTCAAGAAGGTTACTTTGGGTTTGGCTTTAAAGAATGTGGTTGTGCGGAGATGTTTAGCATCCGTTTAACGCCCGGAGCTTACACACTAAACGAGAAAGGACGTCTTTGGCATCTAGCGGATACCGGAGAGTTTAACGTTACTCGTATTGGTGGTTCTTCTCCTACCGTCTACGACCGTTTAGATGCTGGACACATTATCCCTATGAACCCGTACATGGGTGTCTGGGCTGAGTCTAATGAGCGACATCGCTACGGACTGGTGAAAGGTATTCATTCAGAAAACGGTATGGGTTTCTTCTATAAGAACTTATACGGTGGGGTGAATGACTTAACGGTTGCAGGTGTTAAGGTTAAAACCAGTTTACCATTGGACAACATCGATTACGTACATGATCTTCCTCCATACGGTTGGATTGGTACTTGTCTGGATGTGTCCGAACGGGAGAGTGAGTTCGTATGGTCCGTGGGTGGTTCAGATGCACCGACTTCCCATATCCCTAATCAGGTTGGTTTCGGTGGTGGTAACTACAAGGTCATCAACTACGTAGAAGCCACAGACGCGTTCTTAACCAGCATGGGTGTCAATCTATCTGGTCATTGGACAATGGTCTTAGGAGCACGCTACGGGCTTCCTGATCTGATTTACAACACTTACCCTGAAGGTGGTCAAGTCAAGACTAAAGTTTTGATATTCCGATTGAACGCTAACTCGTTAACTCGAATTGATGGTCTGCATAACGGTACCCCAGTAAGTCGTCTGTCTGCTGGTGATAAAGCGACGGTGTTACACCAACGTACTTTGACCCACACTACCCCGGCTTACATCAAACGAACTAAGGTCAATAAACCTGAACCTACTTTGAACACGAACGTGATCAACGTATTGGTGGGTGACTCTGGTCGTACAACTATCATGGTTTGTCCTAACAACCGATTCGGTAATGACTCACATCATACCACGTACCCTATCACTTTGGTGATCAACCAATCTGACAGCAGTGTGGTGGTGTTTGATGAAGAACGTTTCGATGGATGTATTGGGTTGTCTCCAGACTTCGGTTGGGTTAAGACCACCTTTGCAGAACAAACCAAGTTCGGTGGGATGATCAATGCTGGGGTTCAGTTAAACACGGGTTACCAAGTTCGTCCGTCTTATATTCCTGCGGCGAGTGGACCAGTCGGTATGTTTAACATCATTCCTGAGAACGTACACCAATTGTACTTCCCAGTCCCTATGGTTGCATTACGTGGTGATACCCTAGATCGTTCTGAGATGTTAGTTTACAACACTAAACAACTCATCAACGGTGCGTCAGCTGTTTACGACATTTATCTAGTACAAGGACCTAACGGACTTTACTTAGAAGCGGGTAACGCTAAACAACTCGATGACGGGTACTCTGTCGAAGTAACACAAGCTGGTGTTAAACTGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3284ef58bbb9bf013df016ab53f1e9fa5382fe1a65509a0332baebc8b9ee4689
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2766
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50