Protein

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Genbank accession
QAY00793.1 [GenBank]
Protein name
putative DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATIGGIMLPFVRLFDYGNITPGPKNIIKVGASTQGQFVLTDSHELYYIGRNQGGESGNGNKNTVSSWTLVSADVSNFFTGGRTLVIIKNDNTIWTSGETYWFTSSTTTSYSTTLVDRTEWFTNTIPVNQIANIVCNGGVIFVLSSSSVLYGAGANGYRGVLGIGSSSIYTLTLCASNVRKVMSTPNDSMYISIDNKLYSSGWNDRGLHGTGNRTQVNIWGLRSSGVIDAAIGGHTLNYYNGTSYFTCGTTPNFLSSDSTTFKAVPVSTLPNNSPLFMTNSEATSTATQIILTSAYQKGIGGNRGLGLNNSQTGAIYSAANLQLPVEVSEISDVAFSDGLTSLLTKDGNVYSTGSYYAIPGASADVAVFTKIDLPK
Physico‐chemical
properties
protein length:376 AA
molecular weight: 39923,04990 Da
isoelectric point:6,28954
aromaticity:0,10106
hydropathy:-0,03803

Domains

Domains [InterPro]
DC_0433
ATT
1–130
DC_0433 DC_0436
IPR009091
STR
19–254
IPR009091 DC_0436
IPR009091
STR
22–357
IPR009091
IPR051210
Unmapped
30–355
IPR051210
DC_0436
RBD
104–208
DC_0436
QAY00793.1
1 376
Architecture
ATT
STR
RBD
ATT 1-130 | STR 131-357 | RBD 358-376
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QAY00793.1
1 376
Domain Start End Length (AA) Confidence
N-terminal 1 61 61 0,3627
Central domain 62 344 284 0,7012
C-terminal 345 376 31 0,4205
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-61
Central
62-344
C-terminal
345-376

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Ecwhy_1
[NCBI] 		2419744 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAY00793.1 [NCBI]
Genbank nucleotide accession
MH791411 [NCBI]
CDS location
range 319717 -> 320847
strand +
CDS
ATGGCAACAATAGGAGGAATTATGTTACCTTTTGTAAGACTATTTGATTATGGGAATATTACACCTGGTCCTAAAAATATAATAAAAGTTGGTGCTTCTACACAAGGTCAATTCGTATTGACTGATTCACATGAATTATATTACATAGGCAGAAATCAAGGTGGTGAATCTGGAAATGGTAATAAAAACACGGTATCTTCTTGGACATTAGTAAGTGCAGATGTTTCTAATTTTTTCACTGGAGGACGAACACTTGTTATTATTAAAAATGACAATACGATATGGACATCAGGTGAAACATATTGGTTCACATCATCAACAACAACTTCTTACAGTACTACATTAGTTGATAGAACGGAGTGGTTTACAAATACAATTCCTGTGAATCAAATTGCTAATATTGTATGCAATGGTGGTGTAATATTTGTACTCAGTTCAAGTTCAGTACTCTATGGTGCTGGGGCTAATGGATACCGTGGTGTATTGGGGATTGGTTCTTCATCAATATATACATTAACACTATGTGCTTCTAATGTGCGTAAAGTTATGTCTACTCCTAATGATAGTATGTATATTAGCATAGATAATAAGTTATATAGTTCAGGGTGGAATGACCGTGGATTACATGGCACAGGGAACAGAACACAAGTTAACATTTGGGGACTGCGTAGTTCTGGTGTAATAGATGCAGCTATTGGTGGACATACACTCAATTACTATAATGGTACATCATATTTCACATGTGGTACAACTCCAAACTTTCTTAGTTCAGATTCAACTACATTCAAAGCAGTTCCTGTAAGTACTTTACCTAATAATTCACCTTTGTTTATGACAAATTCAGAGGCAACAAGCACGGCTACGCAAATTATATTAACTAGTGCATATCAGAAAGGTATTGGGGGAAACCGTGGTTTGGGATTAAACAATTCTCAAACGGGTGCTATCTATAGTGCTGCTAATTTACAATTACCTGTAGAAGTTAGTGAGATTAGTGATGTTGCTTTTAGTGACGGATTAACATCATTATTAACCAAAGACGGGAATGTATATAGTACTGGATCGTATTACGCCATTCCAGGTGCAAGTGCAGATGTTGCAGTCTTTACTAAAATTGATTTACCAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c15f63b203ecfc79d86a777fa2c7dbfade3566c9277650239cd76c45011fa0e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8388
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecwhy_1, Complete genome sequences of 3 novel enterobacteria, Pakpunavirus like phages Yuan,S., Ma,Y. and Liu,Q. 2020-07-27 — GenBank