Protein

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Genbank accession
DBA08404.1 [GenBank]
Protein name
Tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MARAWINNWKTTLSVGLSPGALSLTVPDAAAALLPLSGGSWVLLTLADDAGAQHEIVKATARAGGVVTIERAQEGTSDGNWPTGTVIYAAVTAGDLMTLQARIQALESGASGGTLVDETGATLVDDAGNNLIMENI
Physico‐chemical
properties
protein length:136 AA
molecular weight: 13801,36160 Da
isoelectric point:4,24004
aromaticity:0,03676
hydropathy:0,24044

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS-D14E
[NCBI] 		2965061 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DBA08404.1 [NCBI]
Genbank nucleotide accession
BK061478.1 [NCBI]
CDS location
range 34006 -> 34416
strand +
CDS
ATGGCGAGAGCCTGGATCAACAACTGGAAGACGACGCTGAGCGTAGGGCTGTCGCCTGGCGCGTTGAGCCTGACGGTGCCGGATGCCGCCGCCGCGCTGCTGCCTCTCTCCGGCGGTAGCTGGGTGCTGTTGACGCTGGCGGATGACGCTGGCGCGCAGCATGAAATCGTGAAGGCAACCGCCCGCGCCGGTGGGGTGGTGACGATCGAGCGCGCCCAGGAAGGAACCTCCGACGGCAACTGGCCGACGGGAACGGTGATCTACGCCGCAGTCACCGCTGGTGACCTCATGACGCTCCAGGCGCGCATCCAGGCTCTGGAGTCCGGGGCGTCTGGCGGCACCCTTGTCGACGAAACCGGCGCAACGCTGGTCGACGACGCCGGCAACAACCTGATCATGGAGAACATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f3ba20544bceaab53cd69d4ac16ee2e963dfd2a8421d537f5b9048bf63511884
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8503
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage identification and molecular analysis in the genomes of 53 Pseudomonas aeruginosa strains isolated from critical care patients Gonzalez de Aledo,M., Blasco,L., Lopez,M., Ortiz-Cartagena,C., Bleriot,I., Pacios,O., Hernandez-Garcia,M., Canton,R. and Tomas,M. 2023 — GenBank