Protein

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Genbank accession
APC43264.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MGFNVVPAPEVSGLTGAPGPQGLKGDTGDTGPAGPKGATGATGATGATGPQGPKGADSTVPGPQGPKGDKGDTGPAGPTGPKGADSTVPGPTGPTGATGPQGPKGDTGATGPQGPAGTAALTANQRFALHGRHMMTGGGNIMWDGRNLKWTKRFMVLGMGRGSGLATGGYFQIDPPPAGAVIPEVGDTTYTSVTVAADGTIPLGTNAWCTLWYKLPFGGAATSVPGNFLITSYRADMAPPGDDYVMVAATNYEASPAAQYSLKLGTGEQFDHWKSFTYKNGWTSYQSATEGVYPEPAGVLDGASNFRGAAYRLGAGRMVEFKGLIKGGVATATYDIAVMPVGYRPFANHIFYLPNNAAMMRVDIFSEGGYVTVGSPGIGTINNSWVDLSTVRYPAEK
Physico‐chemical
properties
protein length:397 AA
molecular weight: 40348,67740 Da
isoelectric point:6,90744
aromaticity:0,09068
hydropathy:-0,27128

Domains

Domains [InterPro]
DC_0791
STR
2–62
DC_0791 IPR008160
PTHR24637
Unmapped
13–120
PTHR24637
IPR008160
STR
13–56
IPR008160 DC_1279
G3DSA:1.20.5.320
STR
90–135
G3DSA:1.20.5.320
APC43264.1
1 397
Architecture
STR
STR 2-305 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Joe
[NCBI] 		1913034 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptomyces coelicolor
[NCBI] 		1902 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APC43264.1 [NCBI]
Genbank nucleotide accession
KX815338.1 [NCBI]
CDS location
range 18562 -> 19755
strand +
CDS
ATGGGCTTCAACGTAGTCCCGGCCCCCGAGGTCTCTGGTCTCACTGGCGCTCCTGGCCCGCAGGGCTTGAAGGGCGACACTGGCGACACCGGTCCGGCTGGGCCGAAGGGTGCAACCGGTGCGACTGGAGCTACCGGCGCAACGGGTCCGCAGGGTCCGAAGGGCGCTGACTCCACCGTCCCTGGGCCGCAAGGCCCGAAGGGCGACAAGGGCGACACTGGCCCTGCCGGTCCCACTGGCCCGAAGGGTGCTGACTCCACGGTCCCTGGCCCCACCGGTCCGACTGGAGCCACTGGCCCGCAGGGACCGAAGGGTGACACCGGAGCTACCGGCCCGCAGGGTCCGGCTGGCACTGCCGCGCTCACCGCCAACCAGAGGTTCGCGCTGCATGGCCGTCACATGATGACGGGCGGCGGGAACATCATGTGGGATGGCCGGAACCTGAAGTGGACCAAGCGCTTCATGGTGCTCGGCATGGGTCGCGGCAGCGGCCTCGCGACGGGCGGCTACTTCCAGATCGACCCGCCTCCTGCTGGCGCTGTGATCCCGGAGGTCGGGGATACCACCTACACCTCCGTCACGGTTGCCGCTGACGGCACGATCCCGCTGGGCACCAACGCATGGTGCACTCTCTGGTACAAGCTCCCGTTCGGTGGTGCCGCCACGTCTGTGCCCGGCAACTTCCTGATCACCAGCTACCGCGCGGACATGGCTCCGCCCGGCGACGACTACGTCATGGTGGCGGCAACGAACTACGAGGCATCGCCTGCCGCGCAGTACAGCCTGAAGCTGGGGACGGGTGAGCAGTTCGATCACTGGAAGTCGTTCACCTACAAGAACGGTTGGACCTCGTACCAGTCTGCGACCGAAGGCGTCTACCCCGAACCGGCTGGCGTGCTCGACGGGGCGTCCAACTTCCGTGGTGCCGCCTACCGGTTGGGCGCTGGCCGCATGGTCGAGTTCAAGGGCCTGATCAAGGGCGGCGTCGCCACGGCCACCTACGACATCGCCGTCATGCCAGTGGGATACCGACCCTTCGCCAACCACATCTTCTACCTGCCGAACAACGCGGCGATGATGCGCGTGGACATCTTCTCCGAGGGTGGCTACGTCACGGTCGGATCGCCCGGCATCGGCACGATCAACAACTCCTGGGTGGACCTGTCCACCGTGCGGTACCCCGCAGAGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
20fc9951f7652ba0f4b36014df67b6d21e49029e152d5f63df23a11531c3d12b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5522
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
DNA sequence of the Streptomyces Phage Joe and characterization of phiJoe genome integration and excision Fogg,P.C.M., Haley,J.A. and Margaret,S.C.M. 2017-03 — GenBank