Protein

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Genbank accession
XYL46490.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,54
Protein sequence
MKHNPIGDSMSDLLKQHFRATNGLDAGGNKVINVALADRNVKTDGVSVEYVIQENTIQKYDPTRGYLTDFAVTYGRRIWIANKDIPKPAGDFNQANWTSLRVDPNWIYTVRKGEFEIQSGQFINVDSNAAGNATLLLPLAPDEGDTIVVRDIGGRPGYNGILIKAQDTGASIVFGESRLREVRLTRPYSQIMLTFSNGAWRASLTDFGDTAKMVVPNGIVPTQVQSGDNVVRRYTSNSEIFITLPLFANSNDIINFTDLDGTSPINHMTVRTFDPTISIGTPGQTEIQVRTSGNGFLVYDAIDKIWRIFENDLRTRVRIITSDVTLMPNEHISVFGADNSTVKTINITLPTDVAVGDTVKIAMNYMRKGQTVVIKASDGDTIASNLNLLQFPKRSEYPPDAAWVQSSSITFNGTTSYVPVLELAYIEDKASGKSYWIVTESDPTVERVDAKDNTTRARLGVIALATQAQANAESNPEKELAITPETLNGRRSTETQTGIARIATSSEVNQATTASYLDNVIVTPKKLNERAATETRRGLAEIASNAKMDAGTDDFTIVTPKKLLYRTTSDSRLGVVQLVKTGGAPNTTADRSSAGTGIFDHSDYKNAVTPKTLREYKATVNQSGIVWLASDSEVRNGTPASSNIPTVVTPESLHKKVATDGAIGLIQIATQTEVNAGGVTNKAVTPKTLNDRTATNDRTGIARFATPGAQGEFEAGTSSTVMVNPKLLFDKFANTDRIQVNTSSGLTITGNLWDHYTINIQEASTSQRGTTTLATAAEVRTGTDTKKIVTAATLHAKTATEGAIGLAQYATQAQVDAGALSDRIVPPAYLKQTIQVTESWQATDSVRGTVKLSLGDGTWKGNDTNGSTLPDDGYASKGVAVSPYELNLTLKHYLPRLGKAYDTGMLGGQTPDKYARRDIAQTISGAWTFSQDTSFSNNISVQNIIYANGGEVKISPTADTGNVHVRFQNRDGSERGIIYAEPQTASAGNLKVRVKNGTGTTAASQTYTFGGNGTLDVPNEVSTKTLRSSGNTIVGGTVMVKDVQMLAVEGLNSIFGAQSQSAFIRSRDADTQIFAQDSTGSYPILTTKNYARLADGRYVNKAGDTMTGNLNISGSAIVITGSESWYVPTNETVIRQGSWTAEIKDATKLKGLRGYMVPIRTPIDPANPSTLVVTGYEEKTAAGGVLTQVGVTTSNTYQLWTPYPPTTETADKRFAHTVWMRIYNPNLNKFDDWMRVFTSATPPTAADIGAPSSVSTQVKTLEVLEWIKLGPVKIWPDRPNQTLKFEWVGD
Physico‐chemical
properties
protein length:1290 AA
molecular weight: 139444,36340 Da
isoelectric point:6,50223
aromaticity:0,07132
hydropathy:-0,33752

Domains

Domains [InterPro]
DC_1986
ATT
10–146
DC_1986 DC_1209
IPR048391
ATT
1136–1237
IPR048391
XYL46490.1
1 1290
Architecture
ATT
STR
ATT
STR
ATT 10-146 | STR 357-1135 | ATT 1136-1237 | STR 1238-1279 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL46490.1
1 1290
Domain Start End Length (AA) Confidence
N-terminal 1 849 849 0,8770
Central domain 850 1048 200 0,2427
C-terminal 1049 1290 241 0,6517
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-849
Central
850-1048
C-terminal
1049-1290

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage TPL-03
[NCBI] 		3343752 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL46490.1 [NCBI]
Genbank nucleotide accession
PQ338058 [NCBI]
CDS location
range 48645 -> 52517
strand +
CDS
ATGAAGCATAACCCCATAGGAGACTCTATGAGCGATTTACTGAAACAACATTTCCGTGCAACAAACGGTTTGGATGCCGGCGGAAATAAAGTTATAAATGTGGCACTCGCTGACCGCAACGTTAAAACCGACGGCGTCTCTGTCGAGTACGTTATTCAAGAAAATACTATCCAAAAATATGACCCGACGCGTGGGTATCTCACCGATTTTGCTGTGACTTATGGACGTCGTATCTGGATTGCAAATAAAGATATTCCAAAGCCTGCTGGAGATTTTAACCAGGCGAATTGGACTTCTTTACGTGTTGACCCGAACTGGATTTATACTGTCCGTAAAGGAGAGTTTGAAATTCAATCTGGCCAGTTCATCAACGTTGACTCAAACGCTGCAGGTAATGCTACACTACTGCTTCCGTTAGCACCTGATGAAGGTGATACCATTGTAGTTCGTGATATCGGTGGACGCCCTGGATATAACGGAATTTTAATTAAAGCACAGGATACTGGTGCATCTATTGTCTTCGGCGAATCACGCTTACGTGAAGTAAGACTTACTCGTCCGTATTCACAAATTATGCTTACGTTTAGTAACGGTGCATGGCGTGCTAGTTTAACAGATTTTGGCGATACTGCCAAGATGGTAGTTCCGAACGGGATTGTTCCAACCCAGGTTCAGTCAGGTGATAACGTAGTTCGTCGTTATACTTCCAACTCAGAGATTTTCATTACTCTGCCGTTGTTCGCTAATTCAAACGATATCATCAATTTTACTGACCTTGATGGTACATCGCCGATTAACCACATGACTGTGCGTACGTTTGACCCAACTATCTCGATTGGGACTCCTGGACAAACGGAAATTCAAGTACGTACTTCAGGTAATGGATTTTTGGTGTATGACGCTATTGACAAAATATGGCGTATCTTTGAAAATGATTTACGCACCCGAGTAAGAATAATTACTTCTGACGTTACTTTAATGCCTAATGAGCATATTTCTGTATTTGGCGCAGATAATAGTACAGTTAAAACAATTAACATTACTTTACCTACTGACGTAGCTGTTGGGGATACTGTCAAAATCGCAATGAATTATATGCGCAAAGGACAGACTGTAGTAATTAAAGCTTCTGATGGTGATACCATCGCTAGTAATTTGAATTTACTGCAGTTTCCAAAACGCTCAGAGTATCCACCTGATGCAGCATGGGTTCAATCAAGCTCGATTACCTTTAATGGAACTACGTCATATGTTCCTGTTCTTGAGCTTGCATATATTGAAGATAAAGCATCCGGAAAAAGCTATTGGATTGTAACTGAATCTGACCCTACCGTAGAACGTGTTGATGCTAAAGACAATACTACCAGAGCACGATTAGGTGTTATTGCTCTTGCTACACAGGCTCAAGCTAACGCGGAGTCAAATCCAGAAAAAGAATTAGCAATTACGCCAGAAACCTTAAACGGACGTCGTTCTACTGAAACTCAGACTGGTATAGCAAGAATTGCAACTTCTAGCGAAGTTAATCAGGCAACAACTGCTTCTTACTTGGATAACGTAATCGTTACTCCTAAAAAGCTTAACGAAAGAGCTGCTACTGAAACTCGTAGAGGTTTAGCTGAAATTGCGTCTAATGCTAAAATGGATGCAGGAACAGACGATTTTACAATTGTTACTCCTAAGAAGTTGCTTTATCGTACTACATCAGATTCACGATTAGGTGTTGTTCAGTTAGTAAAAACTGGTGGTGCTCCTAACACAACTGCTGATCGTTCTTCTGCTGGCACCGGTATATTCGATCATTCTGATTACAAAAATGCGGTTACTCCAAAAACTCTTCGTGAGTATAAAGCTACTGTAAATCAGTCAGGAATAGTTTGGTTAGCAAGTGATAGCGAAGTTAGAAACGGAACTCCTGCTTCTTCAAATATTCCTACGGTTGTTACACCAGAATCTTTGCATAAAAAAGTTGCTACTGACGGAGCAATTGGATTAATCCAAATAGCTACACAAACTGAAGTTAATGCTGGCGGCGTGACTAATAAAGCAGTTACACCTAAAACATTAAATGACCGTACAGCAACTAACGATCGTACTGGTATTGCTCGCTTCGCGACACCTGGTGCCCAGGGTGAATTTGAAGCTGGTACTTCAAGTACAGTAATGGTAAACCCTAAATTACTGTTCGATAAATTTGCTAATACTGATCGTATCCAAGTTAATACTAGTTCTGGCTTAACTATTACTGGGAACCTCTGGGACCATTATACCATCAACATACAGGAAGCAAGTACTTCTCAAAGAGGTACAACCACTCTTGCTACTGCTGCTGAGGTTAGAACCGGCACCGACACCAAGAAAATAGTTACTGCTGCCACGCTACATGCTAAAACAGCAACTGAAGGAGCTATCGGTCTTGCTCAGTATGCTACACAGGCACAAGTTGATGCAGGCGCATTAAGTGATAGAATTGTTCCTCCTGCTTACTTGAAACAAACTATTCAAGTAACAGAGTCATGGCAAGCTACAGATAGCGTTAGAGGGACCGTGAAGCTATCCCTAGGCGATGGAACATGGAAAGGTAATGATACTAATGGCTCAACTCTTCCGGATGATGGATATGCCTCTAAGGGCGTAGCAGTGTCTCCATATGAATTGAACCTTACGCTGAAACACTATTTGCCTCGTCTCGGTAAAGCCTATGACACCGGAATGTTAGGTGGTCAAACCCCAGATAAGTATGCTCGTCGTGATATAGCGCAGACTATTTCTGGAGCTTGGACATTTAGTCAGGACACTTCATTTAGCAATAATATTTCTGTCCAGAATATTATATATGCTAATGGCGGTGAAGTTAAAATTTCTCCAACTGCTGACACTGGAAATGTGCATGTGCGTTTTCAGAATAGAGACGGAAGCGAGCGTGGTATAATTTATGCTGAGCCGCAAACTGCTTCAGCCGGAAACTTAAAAGTTCGTGTAAAAAACGGAACAGGAACTACTGCTGCAAGCCAAACTTACACATTTGGTGGAAACGGCACGCTGGATGTTCCTAATGAAGTATCAACTAAAACTTTGAGGTCTTCTGGAAATACAATAGTCGGCGGAACTGTAATGGTTAAGGACGTTCAGATGCTTGCTGTCGAGGGATTGAATTCAATATTCGGTGCCCAATCACAGTCCGCATTTATTCGTTCCCGTGACGCTGATACACAAATTTTTGCACAGGATTCAACTGGATCGTATCCAATTTTAACTACTAAAAACTACGCAAGATTAGCTGATGGCCGTTATGTTAATAAAGCTGGTGACACTATGACTGGCAATCTTAACATAAGCGGTTCTGCTATCGTTATTACAGGTTCTGAATCGTGGTATGTGCCAACGAATGAAACTGTGATAAGACAAGGTTCTTGGACTGCTGAAATTAAAGACGCTACTAAGTTAAAAGGTCTTCGCGGTTATATGGTTCCAATCAGAACACCGATTGACCCTGCTAACCCAAGCACTTTGGTAGTAACCGGATATGAAGAAAAAACTGCAGCAGGTGGTGTTTTAACTCAGGTTGGTGTAACTACAAGCAATACTTATCAGCTTTGGACGCCTTATCCTCCGACAACCGAAACTGCCGATAAGCGTTTCGCGCATACTGTGTGGATGAGGATTTATAATCCAAACCTTAATAAGTTTGATGATTGGATGCGAGTGTTCACGTCTGCTACTCCTCCAACCGCAGCTGATATCGGAGCTCCAAGCTCAGTATCAACTCAGGTTAAAACACTTGAAGTTTTGGAGTGGATTAAGCTTGGCCCAGTTAAAATCTGGCCAGACCGTCCAAACCAAACTCTCAAATTTGAATGGGTAGGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ddf01965e25958d752b694951e995cda3f611b8da60c8a9cd22e30e98ef3aec4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7683
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50