Protein

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Genbank accession
XXK85813.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDLRFPMSLRPIVSKGYSQTRGSNIWRTEVQGGVPRQGRDTYFEPVPISVTLVVSSLGRQAFYSFLNNIDGGASSFIMPHDTGLGIEDHQVLITSDISDSTDDGKNWVITFTATAERTAIQEDTCLTKNLPDLYGCYGDCLGSFLKIYANYETTFPRIWSNEGPAGYPPINLLASTLDSRVVYDGPQIYYINRNGSLVQSAANEWPLTFINGVAAGRVPPESAAENIIIESSDITDASWVRQRTTPSYDGSLASSFAITPNGVTGVHTINQAVSAQILEGEKYTFSVFFKANGYDFARLRAANQDTTHISSAIVDLTSGAIVDGEAYSTITSIGGGWYRVTETVTGPSGGFSGFNIAVWVYQTATVATFAGDGVSGIIVSSPQIEKGEFSTSPIATDASPVTRHSASAKVAMNGATSIDITYSDGSVVNVPSVDDYATIPQADSAWGSKHITRIDFNVDG
Physico‐chemical
properties
protein length:461 AA
molecular weight: 49383,09940 Da
isoelectric point:4,62194
aromaticity:0,09978
hydropathy:-0,10781

Domains

Domains [InterPro]
DC_0353
STR
49–461
DC_0353
NF048003
Unmapped
222–404
NF048003
XXK85813.1
1 461
Architecture
STR
STR 49-461
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Ivi
[NCBI] 		3446501 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXK85813.1 [NCBI]
Genbank nucleotide accession
PV841871.1 [NCBI]
CDS location
range 23264 -> 24649
strand +
CDS
ATGAGTGATTTGAGATTCCCTATGTCCCTTCGACCAATAGTGTCGAAGGGGTACTCCCAAACGCGAGGGAGTAATATCTGGCGTACAGAAGTGCAAGGTGGCGTGCCGCGACAGGGGCGTGATACATACTTTGAGCCCGTGCCGATTAGCGTTACGCTCGTCGTATCGTCGCTCGGGCGACAGGCGTTCTATAGCTTCCTGAACAACATAGACGGCGGTGCGTCTTCGTTCATCATGCCTCATGATACCGGTTTAGGTATCGAAGACCACCAGGTTCTTATTACGTCTGATATTAGCGATAGCACAGACGACGGCAAGAACTGGGTCATTACGTTCACCGCTACCGCCGAGCGCACAGCAATTCAGGAAGACACTTGCCTTACTAAGAATCTGCCAGATTTGTATGGTTGCTACGGGGATTGTCTGGGTAGTTTCCTGAAAATATATGCGAACTACGAGACGACGTTCCCGCGAATCTGGAGCAATGAAGGCCCCGCCGGGTATCCGCCGATTAACCTTCTGGCGTCTACTCTTGATAGCCGCGTTGTGTATGACGGGCCGCAGATTTACTATATCAACCGCAACGGCAGTCTTGTGCAGTCCGCCGCCAATGAATGGCCTCTTACGTTTATTAACGGGGTAGCGGCGGGGCGCGTTCCCCCTGAATCCGCAGCTGAAAACATAATAATTGAGTCTTCAGACATTACCGATGCATCGTGGGTCAGGCAGAGGACAACGCCCAGTTACGACGGGAGCTTGGCTTCATCTTTCGCTATTACCCCAAATGGTGTCACAGGGGTTCACACAATTAACCAGGCCGTTTCCGCCCAGATTTTAGAAGGTGAAAAATATACATTCAGTGTATTTTTTAAGGCGAATGGGTATGATTTTGCCAGACTCCGTGCCGCAAATCAGGATACTACACACATCTCTTCCGCGATAGTAGACCTTACATCCGGGGCCATTGTCGATGGCGAAGCATACTCCACAATAACATCTATAGGAGGCGGATGGTATCGGGTTACTGAAACAGTAACGGGTCCGTCAGGTGGGTTTAGCGGCTTCAATATAGCGGTATGGGTTTACCAAACAGCGACCGTAGCAACGTTTGCTGGTGATGGTGTCAGTGGCATCATCGTGTCCTCACCTCAAATAGAAAAAGGCGAGTTCTCCACATCGCCAATAGCAACCGATGCGTCACCTGTAACCAGGCACTCGGCATCCGCAAAAGTAGCAATGAACGGTGCAACAAGCATCGACATAACCTATTCCGACGGCTCTGTGGTAAACGTTCCGTCAGTAGATGATTACGCGACTATCCCGCAGGCCGATTCTGCGTGGGGTAGTAAACATATCACCCGTATTGATTTTAATGTGGACGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a2a45b57b4d76ab293c6682552022a774c46ef284c1ee1f116923ac2792ce8b2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8889
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages against environmental Escherichia coli isolates and their phage resistance trade-off Soukou,V., Dioli,C., Zrelovs,N., Tseperka,M., Dioli,C., Svanberga,K., Perra,M., Freri,M., Kazaks,A., Vogiatzaki,C., Skliros,D. and Flemetakis,E. 2010-06-04 — GenBank