Protein

View in Explore
Genbank accession
AUS02990.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSRLNDFFAGSNSIDQSALTLDAAAVALGINRNKLKYWFQGESISAPDEIRVFDKIAYYAPTASEINTIICAESPLTDPTTWHEFTVNSTTSEVHVLTDSQLVVTFGSTINVESASFYIDGDLVDSGKLDSTRYTTDSATNSIILAESYPTGTRISAFSNVAEPSSAPNNTGITETVVLTSGQTVVDFTKVRTSATSYYICGDLVDSGRLCAGDYNIIDARTIELTESYPSGTILNAVFNEEVGDISSVDISFNPVTSANGETKTLSVWTSEIPIVGWVNVKDYGAVGNGVADDTVAIQAAINATPEGGTLWFPIGEYYITADLTRNTAIHIIGSGTSHTWIRWDSGVFRIGLDFNSGDIKISDLKLGSNYVRPAGTPPGIQLGYGMRVQTGAYSKFEIKDCDFTGVGTGIIFIDGASEITIKSCNFANIHHGTSSQTGGYGIVLQACQKTLITECIFENTINRRGIYLSTNPTPTQASSDHIVSNNQFYGRTGGSADYPTGYEMHTKIRASSNVTVIGNVYDGGLGGIFGEEATEHSVGNFPVNVTITGNTFRNFNGMNTDNAVVACLNRDARMQNWAVSGNTVENCATRFIVFSDTNNMAISGNSIEIVDGELTEIPVLEAPFGYGLTDINVSTNTFINKSTNANCMKLWMNNGSGDSISDLQISDNIIECSAYSALDIRGYTGNVVGIVLTGNIARGYGGGSILQVSTDEVVELVLGDNIGRSSSATNDRIGQVTSADSGTVRLGSNSGRFDRPSSAIHVYTSSKRNGAKEYVSDSTPTGIEGNVGDIIWKLTPTAGGSIGKVCVTAGSPGTWKDFGSIDV
Physico‐chemical
properties
protein length:824 AA
molecular weight: 87624,97280 Da
isoelectric point:4,57158
aromaticity:0,08374
hydropathy:-0,09915

Domains

Domains [InterPro]
IPR011050
STR
274–565
IPR011050 IPR006626 IPR006626 DC_0276
IPR012334
STR
275–718
IPR012334
IPR024535
ENZ
278–487
IPR024535 IPR006626 IPR011050
DC_2212
ATT
280–310
DC_2212 DC_1683
IPR006626
Unmapped
357–391
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
AUS02990.1
1 824
Architecture
ATT
STR
RBD
ATT 280-310 | STR 311-731 | RBD 732-824
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS02990.1
1 824
Domain Start End Length (AA) Confidence
N-terminal 1 293 293 0,8444
Central domain 294 758 466 0,9879
C-terminal 759 824 65 0,9520
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-293
Central
294-758
C-terminal
759-824

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.275.O._10N.286.54.E11
[NCBI] 		1881285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02990.1 [NCBI]
Genbank nucleotide accession
MG592671.1 [NCBI]
CDS location
range 254956 -> 257430
strand -
CDS
ATGAGTCGTCTAAATGATTTTTTCGCAGGAAGTAACAGCATTGACCAATCAGCTCTTACTCTTGATGCAGCCGCAGTAGCGTTAGGAATTAACAGAAATAAACTCAAATACTGGTTTCAAGGCGAGTCTATCTCAGCTCCTGACGAAATTCGTGTATTTGATAAAATAGCATATTATGCTCCAACAGCAAGCGAAATTAACACAATTATTTGTGCTGAATCTCCACTAACTGACCCAACAACGTGGCATGAGTTCACTGTGAACTCAACAACATCAGAAGTACACGTTTTAACTGATAGTCAGCTTGTTGTAACCTTTGGATCAACAATAAATGTTGAGTCTGCGTCATTTTATATTGATGGCGATCTCGTTGACTCTGGTAAACTTGATTCTACTAGATATACGACAGACAGTGCAACAAACAGTATCATATTAGCTGAATCTTACCCTACTGGGACTAGAATTAGCGCGTTTTCTAATGTTGCTGAACCTTCGTCTGCTCCAAATAATACCGGAATCACTGAGACAGTAGTTCTCACTAGTGGCCAAACAGTTGTTGACTTTACTAAAGTCAGAACTTCAGCAACATCGTACTATATTTGCGGTGATTTAGTAGATAGCGGGCGTTTATGTGCAGGTGACTATAACATAATTGATGCCAGAACTATTGAATTAACTGAATCTTACCCAAGTGGCACTATATTGAATGCTGTCTTTAATGAAGAAGTAGGAGATATCAGCTCTGTTGATATTAGCTTCAATCCAGTAACATCTGCTAATGGGGAAACTAAAACATTATCTGTGTGGACTTCTGAGATCCCAATAGTTGGTTGGGTAAATGTAAAGGACTACGGTGCTGTTGGTAATGGTGTCGCTGATGATACTGTTGCTATCCAAGCAGCTATTAATGCAACACCAGAAGGTGGAACACTGTGGTTTCCTATTGGGGAATATTATATCACAGCTGACTTAACACGAAATACCGCAATACATATAATCGGTTCTGGAACAAGTCACACTTGGATACGTTGGGACTCAGGAGTATTTCGTATAGGATTAGATTTTAACTCAGGTGATATCAAGATTAGTGATTTGAAGTTAGGTTCTAACTATGTGCGACCAGCTGGGACTCCTCCAGGAATTCAACTTGGATATGGCATGCGTGTCCAGACTGGTGCATACTCTAAGTTTGAAATAAAAGATTGTGACTTTACTGGTGTAGGTACAGGTATAATCTTCATCGATGGTGCATCTGAAATAACAATTAAAAGTTGTAACTTTGCTAATATACATCATGGAACTAGCAGTCAAACTGGTGGATATGGTATTGTATTACAGGCATGTCAGAAAACGTTGATAACAGAGTGTATTTTTGAGAATACTATTAACCGTCGTGGTATCTACTTATCAACAAATCCCACACCAACACAAGCATCATCCGATCATATTGTTTCTAATAACCAGTTCTATGGAAGAACTGGAGGATCTGCAGATTACCCTACTGGCTACGAAATGCATACTAAAATACGCGCTAGTTCAAATGTTACTGTAATCGGTAATGTTTATGACGGTGGCTTAGGTGGAATCTTTGGTGAAGAAGCAACCGAACACTCTGTTGGCAACTTCCCAGTTAATGTAACGATTACTGGCAATACATTCCGTAATTTTAATGGCATGAACACAGATAATGCAGTTGTTGCCTGCCTGAATCGAGATGCAAGAATGCAAAACTGGGCTGTATCTGGCAACACAGTTGAGAACTGTGCTACTCGATTTATAGTTTTTTCTGATACTAATAATATGGCCATATCAGGCAATAGTATTGAGATTGTAGATGGCGAGTTAACTGAAATCCCGGTATTAGAAGCACCATTTGGATACGGACTAACAGATATTAATGTATCTACTAATACTTTTATAAACAAATCCACAAATGCAAACTGTATGAAACTTTGGATGAATAATGGTAGTGGCGACTCTATTTCTGATCTACAAATAAGTGATAATATAATCGAGTGCAGTGCTTACTCAGCATTAGACATCCGAGGTTATACAGGGAATGTCGTTGGCATTGTACTTACAGGTAATATTGCCAGAGGTTATGGCGGGGGCTCTATTTTACAAGTTTCAACTGATGAAGTTGTCGAGTTAGTTCTCGGTGACAACATTGGAAGATCATCATCTGCGACAAATGATCGCATTGGTCAAGTAACATCTGCTGACTCAGGAACTGTTAGACTTGGCTCTAACAGTGGTAGGTTCGACAGACCAAGCTCTGCAATCCATGTGTATACTTCTTCTAAGCGTAATGGTGCAAAAGAATATGTATCGGACAGCACTCCTACAGGAATAGAAGGAAATGTTGGGGATATTATTTGGAAACTTACACCAACTGCGGGTGGTAGTATTGGCAAAGTATGCGTAACTGCAGGAAGTCCAGGAACTTGGAAAGACTTTGGATCTATTGATGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0aa110c0c8db9d58360136b64308892a0301730a3dc7db0d68cbcc095ec79efe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7395
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank