Protein

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Genbank accession
APU92898.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANCNDYISADDLKTGKQAILHIEHVAKSRDAAGNPALEVTDTIRGESVTNKTLDGLKNLYNQAISQVGYITLKSFQTGAPLPGNQLTLPNQVLQDETNGEYYRWDGDFPKTVAAGSTPATTGGVGSGAWLSVGDATLRDELNNEGVINFSHTDTYGNDSVGAHLQNVVYPTDAPFNAATDGVTDATVAIKSAIAHCISKGKKLVLNHLFMITDTLVISDGLHVKCLTGDSGVKSDVPAGKYAVKITGANSGWFGGKILGKNLPDSTTVRQDGVLFDENAAYCFITGTEVTGFFAKGLHTSDADGVGYGIYDKGHGTVIAKCYANSKFCVALGGTEGRVIKNHITNNYLTSGEARPWSLASNYWDGIVSENAHRYVIAFNEVSACGQSGIYFGGNGGYSTDNIIVNNTVYNCWNRGIDMGLFSEKSATNDVLRNIVKGNNTYNNRENNIWLAGVSNCSVVGNTSWFDANYDVIFAGYPGGHICISLASGANGEACVGNTIDSNTCIDPRGNAGITVPTGATGNVFGSGNNLSQAGDIYIASPDLITSNRFELSVTGSFTPVLLPASGSISLSSSSTGVFRATGKRIDFSITVNVSSISSPSGMLNIAYLPGMSGKTSSISMFIVDYWNNIILSNGVIPLASLNLSNQDQIVIYRTDGGRVLYDFSSLLTSTSSFVIKGFVDFN
Physico‐chemical
properties
protein length:683 AA
molecular weight: 72201,57250 Da
isoelectric point:5,24518
aromaticity:0,08931
hydropathy:-0,07072

Domains

Domains [InterPro]
DC_0018
ATT
1–260
DC_0018 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_1378
G3DSA:2.10.10.80
ATT
69–144
G3DSA:2.10.10.80 IPR012334 IPR006626
IPR040775
RBD
87–135
IPR040775 IPR011050
IPR039448
ENZ
293–463
IPR039448
APU92898.1
1 683
Architecture
ATT
STR
RBD
ATT 1-260 | STR 261-536 | RBD 537-683
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APU92898.1
1 683
Domain Start End Length (AA) Confidence
N-terminal 1 186 186 0,9900
Central domain 187 544 359 0,9921
C-terminal 545 683 138 0,9900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-186
Central
187-544
C-terminal
545-683

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_Sergei
[NCBI] 		1913117 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Kentucky
[NCBI] 		192955 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APU92898.1 [NCBI]
Genbank nucleotide accession
KY002061.1 [NCBI]
CDS location
range 34639 -> 36690
strand -
CDS
ATGGCTAATTGCAATGATTATATCAGCGCAGATGATTTGAAAACAGGTAAACAAGCGATTTTACACATTGAGCATGTGGCGAAAAGTCGTGATGCTGCTGGTAACCCCGCACTGGAAGTAACAGATACTATCCGTGGTGAATCTGTTACTAACAAAACATTAGATGGACTTAAAAACTTATATAATCAAGCAATATCACAGGTAGGTTATATAACACTAAAAAGTTTTCAGACAGGTGCACCACTACCCGGTAACCAATTAACGTTACCAAATCAAGTACTACAAGATGAAACAAACGGTGAATACTATCGCTGGGATGGTGATTTCCCTAAAACTGTAGCTGCTGGTTCAACTCCGGCGACAACTGGTGGTGTAGGCTCAGGTGCATGGTTGAGTGTTGGTGATGCGACATTAAGAGATGAGTTAAATAATGAAGGGGTAATCAATTTCTCACATACTGATACATATGGTAATGACAGTGTAGGAGCGCATCTTCAAAATGTCGTATACCCAACAGACGCCCCTTTCAATGCCGCTACAGATGGTGTTACAGACGCAACAGTAGCTATTAAAAGTGCAATAGCGCACTGTATATCAAAGGGTAAAAAATTAGTATTAAACCATTTGTTCATGATCACAGATACACTGGTAATCAGTGATGGGTTGCATGTTAAGTGTCTTACTGGTGACTCAGGTGTTAAGTCTGATGTACCAGCAGGTAAATATGCAGTAAAAATAACGGGGGCCAATTCTGGTTGGTTTGGGGGTAAAATCCTGGGTAAAAACTTACCAGACTCTACAACAGTAAGACAGGATGGCGTACTCTTTGATGAGAATGCTGCATACTGCTTTATTACTGGTACAGAGGTTACCGGCTTCTTTGCAAAAGGTTTGCATACCTCAGATGCTGATGGTGTAGGCTATGGTATTTATGATAAAGGGCATGGCACTGTCATCGCTAAATGCTATGCAAACTCAAAGTTCTGTGTAGCTCTGGGTGGTACTGAAGGTCGCGTAATTAAGAACCATATAACCAATAATTACCTTACATCCGGGGAGGCTAGACCCTGGAGTTTGGCTAGTAACTATTGGGATGGGATAGTATCCGAGAATGCTCACAGATATGTCATCGCTTTTAATGAGGTATCAGCCTGTGGACAGAGTGGAATTTACTTTGGTGGGAATGGTGGTTATTCAACAGATAACATCATCGTAAATAACACAGTTTACAACTGCTGGAACCGTGGTATTGATATGGGTTTGTTTTCTGAAAAATCGGCAACAAATGATGTACTCAGAAACATTGTCAAGGGTAACAATACCTATAACAACCGAGAAAATAATATCTGGCTTGCAGGTGTTAGTAACTGCTCAGTAGTTGGTAATACATCGTGGTTTGATGCCAACTATGATGTAATTTTTGCAGGCTACCCAGGCGGTCATATTTGTATTAGTCTGGCTTCTGGTGCAAATGGCGAGGCTTGTGTAGGGAACACAATCGACTCTAATACTTGTATTGACCCTAGAGGTAATGCAGGTATAACAGTACCTACTGGGGCAACTGGTAATGTTTTTGGGTCAGGTAATAATCTATCTCAAGCTGGTGATATTTATATAGCTTCCCCTGACTTGATTACGTCTAACAGATTTGAGCTGTCAGTCACTGGTTCGTTCACACCAGTCCTACTTCCTGCAAGTGGAAGTATAAGCCTATCGTCATCAAGTACAGGAGTCTTTAGGGCAACTGGTAAGAGAATAGATTTTTCTATAACAGTAAATGTATCTTCAATATCATCGCCAAGTGGGATGTTAAATATCGCCTATCTTCCAGGAATGAGTGGGAAAACAAGCTCAATATCAATGTTTATTGTTGACTATTGGAATAATATAATATTATCAAATGGCGTAATTCCATTGGCTTCATTAAATTTATCAAATCAGGATCAAATAGTAATTTACCGAACTGACGGAGGGAGGGTTCTTTATGACTTCTCTTCACTTCTAACTTCAACATCATCGTTTGTAATAAAAGGTTTTGTTGATTTTAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
60ed94cff70ab493555321d4ce7e28becedc1a8dc4f8635a47b8cd7ed70270e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8255
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50