Protein

View in Explore
Genbank accession
YP_010669788.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MALWGNSDNVTSAGIVTVNYSTRVVDGHGTAFGNAGSIQAGDVIRFGDDPTTGVYFGDAVVASITSTSQLTIASTAGLSGAAIAGTNFYASQCPSYTVGDVKYSESSSGTTDAYVYGVAKQGVQNANATVYETGAGWVGVTTYNDQHGNLRVKKEILVAMSGITTGNTPIYDADPLS
Physico‐chemical
properties
protein length:177 AA
molecular weight: 18101,57440 Da
isoelectric point:4,40703
aromaticity:0,09040
hydropathy:-0,01469

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SCSM1
[NCBI] 		2588487 Uroviricota > Caudoviricetes > Pantevenvirales > Zhoulongquanvirus > Zhoulongquanvirus esscess
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010669788.1 [NCBI]
Genbank nucleotide accession
NC_070962.1 [NCBI]
CDS location
range 92158 -> 92691
strand +
CDS
ATGGCACTTTGGGGAAATAGTGACAATGTAACCTCTGCTGGCATCGTAACCGTAAATTACTCCACCCGCGTTGTTGATGGACACGGAACTGCATTCGGTAATGCAGGGTCTATCCAAGCAGGTGATGTCATCAGATTCGGTGATGATCCAACAACTGGTGTATATTTTGGTGATGCTGTTGTAGCATCTATTACAAGCACTTCACAACTAACTATTGCTTCTACTGCTGGACTCAGTGGTGCTGCAATCGCAGGAACTAACTTCTATGCAAGTCAGTGTCCTTCATATACTGTTGGAGATGTCAAGTATAGTGAGTCTTCCAGTGGTACTACTGATGCTTATGTCTACGGTGTGGCAAAGCAAGGTGTTCAAAATGCAAATGCAACAGTGTATGAAACTGGTGCAGGTTGGGTTGGAGTTACCACCTACAACGATCAGCACGGCAACCTAAGAGTTAAGAAAGAGATTCTAGTTGCAATGTCTGGAATCACCACAGGCAACACCCCAATTTATGACGCAGATCCACTAAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3a0c8ff1838b51deb539f3da05dfa5637ced600da6cf2571bf49d192bb6953de
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5529
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and proteomic characterization of cyanophage S-SCSM1 provides new insights into understanding the viral gene diversity and phage-host interactions Wang,Q., Xu,Y., Jiao,N. and Zhang,R. 2022-10-26 — GenBank