Protein

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Genbank accession
AUR90488.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAVTFTRTGAQIEEIHNTVDDPKSNAQFSNDIRTIAGEYRGLWPDTGGSANKGDTYQTQVSGTPTGQYFTALQNTTVDPVSDDVNWREVFSIATLPNYTCIVYKASGGNSAVDNMILNADVNQTSCTGDTEWLRIGNANGDIKDYQCLSDKANLNDFGIELLSSSEFASTLNQIMTDLKSIGVRVGVFSGSYDHTDPIVIPSAFFLEGINKSSFLTKTTNNTSGLPKLTGSYGGDLVMDVDASIILDHGYGAGFDNIELRTFAPVSVEHAIYHGFTRETSIGKRNVRLGELDTSDNGKRQFVNGITAQQGFFHDYGKITMFCKDTTWNYELNQAGTGCNVITCVQAWSYLATDVAIKFEGCTSVSLGQQYLEDTKVGVFRFFGSTGVTFDVLSIDRHECSAARSALYNRHSQITIGALTVNGITVAAANVANFIELSSGGSSIYSSLTINGVTSQTGDRNIVGLTTILKGRDFCAIRGVPMPPIGEFGNIGCAPNSLWSALEDTGKATTDQDRSILNSYESQAKNIRSMVAESFRCIADKDYSTVIGSTFVRPQNNYETCGGFGGSSGIFDTDTLSSNRKWSLEGLTGNIYGEGTVAGGHTFADFAEYFENAELGVIPLGVLVELEGDKVKPANGDEFIGVVSGTAGFILNEAKIGWQGRYLIGEFGEPIWEDVDDSEGNVVTVRKGNPDYSPEKESLGFDDEGNEILGEVIYSSRSERPREWSCVGLTGQVYVSVDESVCVGDYLTAVDGVGFKSEVKTQCRVMKKTSESIAKCLIK
Physico‐chemical
properties
protein length:778 AA
molecular weight: 84014,30660 Da
isoelectric point:4,63922
aromaticity:0,09383
hydropathy:-0,21401

Domains

Domains [InterPro]
DC_0090
STR
4–776
DC_0090
G3DSA:2.160.10.20
RBD
491–597
G3DSA:2.160.10.20 G3DSA:2.40.300.10
IPR021865
CHP
544–770
IPR021865
G3DSA:4.10.80.40
RBD
656–695
G3DSA:4.10.80.40
AUR90488.1
1 778
Architecture
STR
STR 4-776 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR90488.1
1 778
Domain Start End Length (AA) Confidence
N-terminal 1 166 166 0,9881
Central domain 167 496 331 0,9521
C-terminal 497 778 281 0,8479
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-166
Central
167-496
C-terminal
497-778

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.144.O._10N.286.45.B3
[NCBI] 		1881428 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR90488.1 [NCBI]
Genbank nucleotide accession
MG592515 [NCBI]
CDS location
range 27255 -> 29591
strand +
CDS
ATGGCTGTTACATTTACAAGAACAGGCGCGCAGATTGAAGAGATTCATAACACTGTTGACGACCCAAAAAGCAACGCACAATTCAGCAATGACATTCGCACAATTGCCGGTGAGTATCGCGGATTGTGGCCAGACACAGGCGGCAGTGCTAACAAAGGAGATACATACCAAACTCAAGTGAGCGGCACACCTACAGGTCAATACTTTACAGCACTACAAAACACAACCGTTGACCCTGTTAGTGATGATGTGAATTGGCGTGAGGTTTTTAGCATTGCAACTCTTCCCAATTACACGTGCATAGTTTACAAGGCGTCAGGTGGCAATTCTGCTGTTGATAATATGATTTTAAATGCGGATGTTAATCAAACATCATGCACTGGCGATACAGAATGGCTAAGGATAGGAAACGCAAACGGAGATATAAAAGATTATCAGTGCTTAAGCGATAAAGCCAACCTTAACGATTTTGGCATTGAACTTTTGAGCTCTTCAGAATTTGCATCAACTTTAAATCAGATTATGACTGACCTTAAGTCTATTGGTGTTCGGGTTGGTGTATTTTCTGGTAGCTATGATCATACGGACCCGATTGTAATCCCTTCAGCTTTTTTTCTTGAGGGTATAAATAAATCATCATTCCTTACAAAAACAACAAATAATACATCTGGATTGCCTAAGCTTACTGGTTCATATGGTGGCGATTTGGTGATGGATGTTGACGCGTCAATAATATTAGACCATGGCTACGGTGCGGGATTTGACAACATTGAGCTTAGAACTTTTGCCCCTGTATCTGTTGAGCACGCTATTTATCATGGATTCACGCGAGAAACCAGTATTGGTAAAAGAAACGTAAGACTCGGAGAGCTCGACACTTCAGACAACGGGAAAAGACAGTTTGTAAATGGAATTACAGCTCAACAAGGTTTCTTCCACGACTACGGCAAGATAACAATGTTCTGTAAGGACACTACGTGGAACTATGAGTTAAATCAGGCTGGCACTGGTTGCAATGTAATAACCTGCGTACAGGCGTGGAGCTATTTAGCAACTGATGTTGCAATAAAATTTGAAGGTTGCACAAGCGTTTCATTGGGTCAGCAGTACCTTGAAGATACCAAGGTTGGCGTGTTTAGATTCTTCGGGTCGACTGGTGTTACCTTTGACGTCCTATCAATTGACCGCCACGAATGCTCAGCAGCAAGATCGGCACTTTACAATAGGCACTCACAAATAACCATAGGCGCGTTGACCGTTAACGGGATCACTGTGGCTGCGGCTAACGTTGCTAACTTTATTGAACTCTCTAGCGGTGGGTCTTCAATATATTCCTCATTAACAATCAACGGGGTAACATCTCAAACAGGAGATCGAAACATTGTTGGGTTAACCACGATCCTAAAAGGCCGGGACTTCTGCGCTATTCGTGGCGTACCGATGCCACCCATCGGTGAGTTCGGCAATATTGGCTGTGCTCCTAACTCACTGTGGTCTGCATTGGAAGATACTGGAAAGGCAACTACAGACCAAGACAGATCAATACTAAATAGTTACGAGTCGCAAGCTAAGAACATACGTTCAATGGTTGCTGAGTCGTTCAGGTGTATTGCTGATAAGGACTACTCAACTGTAATTGGTTCTACTTTTGTAAGACCTCAGAATAATTATGAGACTTGCGGAGGGTTCGGGGGTTCTTCTGGCATTTTCGATACGGACACGCTAAGCAGTAATCGAAAGTGGTCACTAGAAGGGTTAACGGGCAACATATACGGAGAGGGAACGGTCGCGGGTGGTCACACGTTCGCTGATTTCGCTGAGTACTTTGAGAACGCAGAGCTGGGGGTTATCCCACTTGGAGTATTAGTTGAACTAGAGGGAGATAAAGTTAAACCTGCTAACGGTGACGAATTTATCGGTGTTGTATCTGGTACGGCTGGTTTTATTCTTAATGAAGCTAAGATTGGTTGGCAAGGACGATATTTAATCGGTGAGTTCGGTGAACCTATTTGGGAAGATGTTGACGATAGCGAAGGAAATGTAGTCACAGTAAGGAAGGGGAATCCTGATTATTCACCAGAAAAGGAATCCCTTGGATTTGATGATGAAGGTAATGAAATTCTTGGCGAGGTTATTTATTCATCACGTTCCGAGCGTCCTAGAGAATGGTCTTGTGTTGGGCTGACAGGGCAGGTTTATGTTTCAGTTGATGAGTCTGTATGTGTGGGCGATTACTTGACAGCAGTTGATGGGGTTGGATTTAAGTCTGAAGTGAAAACTCAATGTAGAGTTATGAAAAAGACATCTGAATCAATCGCGAAGTGTTTGATAAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
365f1a73e3bc75de7b45d9d4dafa82294198087befd238391462deb118da6812
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7025
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank