Protein

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Genbank accession
WBC28528.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIKDRGNIALLESEEAKGVSFDGSTDYLSRSTDLAGNTDSKTFTFSCWVYRSKNSSGTDRIYSSGLGNSTVNSLFAVDIVGITNKIICRAWNSSGSLILDVILDNILAINTWSNIQISIDLANPLNKGIVINDVDYTSSATFPTYTNDTIDFTVPYRGIGFNAYDNTEHLDVAYRMYGFVLDYTHRDLSVVANRRLFITEDLKPVDTSPLNAILDLPMESASTAHINRETGGDFVQNGTLATVDRGANQPNGTICVIDGSNYLTHATESGATLSYWSVNNGIMIHNYSTGSVSIGDITSALGDAVGEVYLTTATIDESEFITNDGICIPVREVIQNTGDNPKIALPCSADNPTLNLGSTGDYGKIGSPSGYRGGSEYISRSAIVDTSNYLTGSVFCQSLVKWTSSDSGVTWNVTYSNSETVTNIGNGINNGIVSYYFGFSDNINWALETNKNLITNQLGYPRKPSDVIRDSEWTPVLGLFFDDSNNYGLNRYGADFTVNGTISQGEDFNI
Physico‐chemical
properties
protein length:510 AA
molecular weight: 55319,27390 Da
isoelectric point:4,37782
aromaticity:0,09804
hydropathy:-0,19804

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
2–173
G3DSA:2.60.120.200
DC_2085
STR
6–182
DC_2085
IPR013320
STR
12–121
IPR013320
WBC28528.1
1 510
Architecture
STR
STR 2-182 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBC28528.1
1 510
Domain Start End Length (AA) Confidence
N-terminal 1 244 244 0,0649
Central domain 245 499 256 0,8882
C-terminal 500 510 10 0,1309
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-244
Central
245-499
C-terminal
500-510

Taxonomy

  Name Taxonomy ID Lineage
Phage Thiohalocapsa phage LS06-2018-MD03
[NCBI] 		3003841 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBC28528.1 [NCBI]
Genbank nucleotide accession
OP947165 [NCBI]
CDS location
range 29096 -> 30628
strand -
CDS
ATGATAAAAGATAGGGGTAATATTGCATTGCTAGAGTCCGAAGAAGCTAAAGGTGTTTCTTTTGATGGTTCAACTGATTATCTTAGTAGAAGTACAGATTTGGCAGGTAATACCGATAGTAAGACTTTTACTTTTAGTTGTTGGGTTTATCGTTCAAAAAATTCAAGTGGTACAGATAGAATATACTCTTCGGGTTTAGGAAACTCTACGGTAAATAGTCTTTTTGCAGTAGATATTGTAGGTATAACAAATAAAATTATATGTAGAGCTTGGAATAGTTCAGGTAGCTTAATTTTAGACGTGATATTAGATAATATACTGGCTATTAATACATGGAGTAATATTCAAATAAGTATAGATTTAGCTAACCCGTTAAATAAAGGTATTGTGATAAACGATGTAGATTATACTTCAAGTGCTACATTTCCTACATACACAAACGACACTATAGATTTTACAGTCCCATACAGAGGTATAGGTTTTAATGCGTATGACAATACTGAACATTTAGATGTGGCGTATCGAATGTACGGATTTGTTTTGGATTACACTCATCGAGACTTAAGTGTAGTGGCAAATAGGCGTTTATTTATAACAGAAGATTTAAAACCAGTTGATACATCCCCATTAAATGCCATTTTAGATTTACCTATGGAAAGTGCGTCAACTGCTCATATAAATCGTGAAACTGGCGGTGATTTTGTTCAAAATGGAACTTTAGCTACAGTTGATAGGGGGGCTAATCAACCTAACGGAACTATATGTGTAATAGACGGGAGCAACTATTTGACCCACGCTACAGAAAGCGGAGCTACCTTGTCTTATTGGAGTGTAAATAATGGTATTATGATACATAATTATTCTACAGGGAGTGTGTCTATTGGGGACATCACAAGTGCTTTGGGTGATGCGGTAGGTGAAGTTTATTTGACAACAGCAACAATAGATGAAAGCGAGTTTATTACTAACGATGGCATCTGTATACCTGTTAGAGAAGTCATACAAAACACAGGTGATAACCCTAAAATAGCATTGCCTTGTAGTGCAGACAATCCAACATTAAATTTAGGTAGTACAGGTGATTATGGTAAAATAGGTTCACCTAGTGGCTATCGTGGGGGGAGTGAATATATTTCACGTAGTGCAATAGTCGATACCTCTAACTACTTAACGGGTAGCGTGTTTTGTCAAAGTTTAGTAAAATGGACTTCATCGGATAGTGGTGTTACGTGGAATGTAACTTATTCAAACAGCGAAACAGTTACAAATATTGGAAATGGAATAAACAACGGGATTGTGTCTTATTATTTTGGATTTAGTGACAATATTAATTGGGCTTTAGAAACAAATAAAAACTTAATCACTAATCAATTAGGTTACCCAAGAAAACCAAGTGACGTTATAAGGGATAGTGAATGGACACCTGTTTTAGGTTTATTCTTTGATGATTCAAATAACTATGGTTTAAACAGATATGGTGCAGATTTTACTGTCAATGGTACTATATCGCAGGGTGAAGATTTTAATATATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5c6eec684d4962f47baac0f6dfc68c570f4510552f5862bee1123572f48496d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4932
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Horizontal gene transfer and CRISPR targeting drive phage-bacterial host interactions and co-evolution in pink berry marine microbial aggregates Kosmopolous,J.C., Campbell,D.E., Whitaker,R.J. and Wilbanks,E.G. — — GenBank