Protein

View in Explore
UniProt accession
A0A8S5SYD4 [UniProt]
Protein name
Tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MPIITRIIRFLRIGVGISDTDVEYADSTSSTVAPNTGWQTTAPKWQNGHFIWSRTRIYYTNGQEKISNPVCLPSGKGVVSIVEQYYQSASSSILTGGTWVSNKAPAYVEGKFIWTRSVITYTDGSSTATDAVCVTGSKGDKGDKGDKGSTGSVLRGPQLWNTCINGYRFEAGGEGEEWKDTVFYNGYTYSCIKTHVKTADNYPGSAADLNNHYWRLGQSIELLIAHIILTQYQMVENLGVRTIEMKDKDGNIVFKAKDGDLVCKGGNFENITASGNFKSRNEKTWNEIEMNADKGYLVMRGPTSVNDDNWDLPSSIAEMTDLFKVKFESDGDTLSRIATMDLFGFGGRKRVNIDPEFGLRIYSNEGTDDESHLFLGKDSIDYSDGLGHVYHSDWNSLLKKYYK
Physico‐chemical
properties
protein length:403 AA
molecular weight: 44847,46940 Da
isoelectric point:5,60639
aromaticity:0,11166
hydropathy:-0,49454

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5SYD4
1 403
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,7557
Central domain 241 392 153 0,8999
C-terminal 393 403 10 0,5433
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-392
C-terminal
393-403

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctOXk3
[NCBI] 		2827861 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF56025.1 [NCBI]
Genbank nucleotide accession
BK032706 [NCBI]
CDS location
range 12376 -> 13587
strand -
CDS
ATGCCAATTATAACAAGAATTATCAGATTTCTCCGCATCGGTGTTGGCATATCCGACACCGATGTCGAGTATGCTGACTCCACGAGCAGCACCGTAGCGCCAAACACAGGCTGGCAGACTACAGCGCCGAAGTGGCAAAATGGTCACTTCATCTGGTCCAGAACTCGTATATATTATACCAATGGTCAAGAGAAGATCAGCAATCCTGTCTGCTTGCCATCCGGAAAGGGTGTAGTCAGCATCGTAGAGCAGTATTACCAGTCTGCGTCATCGTCGATACTTACAGGCGGCACCTGGGTCAGCAACAAGGCTCCTGCTTATGTTGAAGGCAAATTCATCTGGACTCGTTCAGTCATTACTTATACAGATGGCAGCAGTACTGCTACTGATGCCGTATGCGTGACCGGCAGCAAGGGAGACAAGGGAGATAAAGGCGACAAGGGCAGCACCGGCAGCGTCCTTCGAGGTCCGCAGCTGTGGAATACCTGCATCAATGGATACAGATTCGAAGCTGGTGGCGAAGGTGAAGAGTGGAAAGATACGGTCTTCTATAATGGCTATACCTATTCCTGCATCAAGACGCACGTCAAGACAGCAGATAATTATCCGGGGTCTGCAGCTGATCTGAACAACCATTATTGGAGACTGGGTCAGTCTATCGAACTCCTCATAGCCCACATCATCCTCACCCAATATCAGATGGTAGAGAACCTGGGTGTCCGTACCATCGAGATGAAAGATAAGGACGGCAACATTGTCTTCAAAGCTAAGGACGGCGATCTCGTTTGCAAGGGTGGCAATTTCGAAAACATTACGGCATCAGGAAACTTCAAGTCAAGAAATGAAAAAACCTGGAATGAAATCGAAATGAATGCTGATAAGGGTTACCTTGTAATGCGAGGACCAACTTCAGTTAACGATGACAACTGGGATTTACCAAGTTCAATTGCTGAAATGACAGACCTATTCAAGGTAAAATTTGAGTCAGATGGTGATACGCTGAGTCGAATTGCGACAATGGATTTATTTGGATTTGGTGGAAGGAAACGGGTGAATATAGATCCAGAATTTGGTTTAAGAATATACTCTAATGAGGGGACAGATGATGAGAGTCATCTGTTTTTGGGCAAGGATTCGATTGATTATAGTGACGGATTAGGTCATGTGTATCATAGTGATTGGAACAGTTTGCTAAAAAAATATTATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7e619e02138314d610ebd4154ed5852a79e5be929cb95b7c9ad4847d831ea19f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8122
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50