Protein

View in Explore
Genbank accession
UFD98187.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,63
Protein sequence
MSTQVKNVEMPYGLTMTGEQVFEGRVVAKGGIKLEGTLEFEANTTLGTANNRLTGIWTGYINAASGFRLNGGFVFDEDGTTSIGTSSVRANMIFAKGVDLEDGLIMKGGIAFTDDNNSNFGSTTKRAKTIFTNAIDIANGILLKGGLSLADGNTNIGSTTTKVNKIFVQDAQADKVSVGSEGVVGTTSLKFTTNTGVKLQHVIGANTYDIYTTGNKPSWSDVGGTDYMSKSGNVLTLAELNEIIPKTDKAVKLGRTGLRLSEVWSEIYRGKDVDIEGDYKVAGVRQPVWRSGTAAPVDSVGKDGDFYVKRSA
Physico‐chemical
properties
protein length:312 AA
molecular weight: 33129,80040 Da
isoelectric point:6,00177
aromaticity:0,07692
hydropathy:-0,22372

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BX-1
[NCBI] 		2894594 No lineage information
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UFD98187.1 [NCBI]
Genbank nucleotide accession
OK428602 [NCBI]
CDS location
range 121565 -> 122503
strand -
CDS
ATGAGTACACAAGTTAAAAACGTTGAAATGCCCTATGGGTTGACCATGACTGGTGAACAGGTATTTGAAGGCCGTGTCGTTGCCAAGGGTGGTATTAAACTCGAAGGTACGTTAGAGTTTGAAGCCAATACAACATTAGGTACTGCTAACAACCGATTAACCGGTATATGGACTGGTTACATCAATGCTGCTTCAGGTTTCCGACTTAATGGTGGGTTTGTTTTCGATGAAGACGGTACAACTAGTATCGGCACATCGTCAGTTCGAGCGAATATGATTTTTGCCAAAGGTGTCGACCTTGAAGATGGTCTCATCATGAAAGGTGGTATTGCTTTCACTGATGATAATAACAGCAATTTTGGTAGTACAACAAAACGTGCCAAGACTATCTTTACTAATGCGATTGATATCGCCAACGGTATCCTTCTTAAAGGTGGATTGTCTTTGGCTGATGGCAATACAAATATTGGTAGTACGACCACTAAGGTTAATAAAATATTTGTACAGGATGCACAAGCTGATAAAGTATCCGTCGGAAGCGAGGGCGTCGTTGGTACAACTAGTCTAAAGTTTACAACTAATACTGGGGTTAAGCTTCAACATGTGATCGGTGCTAACACATATGATATCTATACAACTGGTAACAAACCAAGTTGGTCAGATGTAGGCGGAACCGATTATATGTCAAAATCTGGTAATGTGTTAACATTGGCAGAATTAAATGAAATCATCCCGAAGACCGATAAAGCCGTGAAACTTGGTCGCACAGGATTGCGATTAAGTGAAGTGTGGTCAGAAATCTATCGCGGTAAAGATGTAGACATCGAAGGTGACTATAAAGTTGCTGGTGTGCGTCAACCTGTATGGCGAAGTGGTACTGCTGCACCGGTCGATTCTGTTGGCAAGGATGGTGATTTTTACGTTAAACGGAGCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a1f12334c1f47c0b3d3dd6f89dade0b4e5e83123f1d4454a419be4e6615b1f7e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8016
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and Biological Characterization of the Fish Pathogen Vibrio alginolyticus AP-1 Li,R., Li,X., Wang,X. and Tan,D. 2019-01-09 — GenBank