Protein

View in Explore
Genbank accession
WEV90011.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLRFVNNWSAELLQPLASNALQLEVAPELAARLEFGAGDHYLLTLLDTTPGSTAYEVVRVTAASGGVLTLAERGVEDRPAQDWLAGARVICSCTAATLQALAAAGGGGGGGGYGQQILDVTFDGTYTLTDDHGLVEMRLNQMENPASLVIPNAPRQVDVFIRSSTGSPPFTISTPGNTPTVEGSTGSWYTSSGTDLIIENLNGIVWGRLYVNPNAGTCHLLVLHERSFDT
Physico‐chemical
properties
protein length:230 AA
molecular weight: 24262,89890 Da
isoelectric point:4,54157
aromaticity:0,06957
hydropathy:0,03261

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PotUPM1
[NCBI] 		3035940 No lineage information
Host Pseudomonas otitidis
[NCBI] 		319939 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WEV90011.1 [NCBI]
Genbank nucleotide accession
OQ633420.1 [NCBI]
CDS location
range 9437 -> 10129
strand -
CDS
ATGCTCAGATTCGTCAACAACTGGTCGGCCGAGCTGCTGCAGCCACTCGCCTCCAACGCCCTGCAGCTGGAGGTCGCCCCGGAGCTGGCCGCACGGCTGGAGTTCGGCGCCGGCGACCACTACCTGCTGACCCTGCTGGACACCACGCCGGGCTCCACCGCCTATGAGGTGGTGCGGGTCACCGCTGCCAGCGGCGGCGTGCTGACCCTCGCCGAGCGCGGTGTCGAAGACCGCCCGGCCCAGGACTGGCTGGCCGGCGCCCGGGTGATCTGCTCCTGCACCGCCGCCACCCTCCAGGCGCTGGCAGCAGCGGGCGGGGGAGGCGGTGGCGGCGGGTACGGCCAGCAGATCCTCGACGTCACCTTCGATGGCACCTACACCCTCACTGACGACCACGGCCTGGTGGAGATGCGCCTGAACCAGATGGAGAACCCCGCCAGCCTGGTAATCCCCAACGCCCCGCGCCAGGTGGACGTGTTCATCCGCAGCAGTACCGGCTCGCCGCCGTTCACCATCAGCACCCCGGGCAACACCCCCACCGTCGAGGGCAGCACGGGCAGCTGGTACACCAGCAGCGGCACCGACCTGATCATCGAAAACCTCAACGGCATCGTCTGGGGCCGGCTGTACGTCAACCCCAACGCCGGCACCTGCCACCTGCTCGTCCTGCACGAACGCTCGTTCGACACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3d861f25f596aa19f87005d53fe2435ae81624b4ce2e27ef5da83129f56d883
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8465
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Pseudomonas otitidis and its bacteriophage from tilapia Tee,A.N., Song,A.A.L., Chong,C.M., Mohd Yusoff,K., Mohd Asrore,M.S., Gan,H.M., Megat Mazhar Khair,M.H. and Yam,H.C. 2024-02 — GenBank