Protein

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Genbank accession
WGG14594.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MGFFAGKYSDGKTVLSLNTESGGDINRHYSPNASSIFHSDMPFVLVDGTYEAGLGNAGNGFFVCQMPSDIINIKSNDPGRVILTAIEINGTHRAFLNGTQSQVGQFTAFFEDPPIGRAGAEVGLTSAFASGNSLAHGTYIYNSGLGHEESIARQGTGGTISQASGFNLYRPGGAYAGEAIGRAWTLAGFPAGASTVPIDGGNADYWHPNWQAPIGAAHRGHNWFYVCNSNIRGYVGKKGTVPYNVNLLYQSPTYPDKVYICKGSTSNLAAQAAKKVYVQDGYNITPTKVIWYVLNLRYSNGNMGVSGNPFTGSDILITPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYIGNNAAYTGAFGDTTARCEIVGSSNGSLWSPVDYGGAKSQISIYKFGAGKQWYVNSSNNTIGNEHGAVWSPSTVPLRLFPNNVASTYVGDDITPTYPGAGNYYRALATIGLGLPNANATVILTTEVIMGNINTAGGAIRTYGGVAWQVQGRRQHSYTEGDGIFHQILTLPPGYLVPYHSTTAYSYTQTWASRPDELTFRRNGYIYTIKNLGNGNAELGVIIHADEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63803,33950 Da
isoelectric point:8,39625
aromaticity:0,11933
hydropathy:-0,21345

Domains

Domains [InterPro]
IPR059609
RBD
1–595
IPR059609
WGG14594.1
1 595
Architecture
RBD
RBD 1-595
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGG14594.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0432
Central domain 11 212 203 0,6514
C-terminal 213 595 382 0,8674
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-212
C-terminal
213-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage phC11
[NCBI] 		3038309 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGG14594.1 [NCBI]
Genbank nucleotide accession
OQ680480 [NCBI]
CDS location
range 83493 -> 85280
strand +
CDS
ATGGGTTTTTTCGCTGGAAAATATAGCGATGGTAAGACCGTACTATCTTTAAATACTGAATCTGGTGGTGACATTAATCGTCACTATAGTCCAAATGCTAGTAGTATTTTTCATAGCGATATGCCATTTGTCCTAGTTGATGGTACTTATGAGGCTGGGTTAGGAAATGCCGGAAATGGGTTTTTTGTATGTCAGATGCCCTCTGACATAATAAATATTAAATCCAATGATCCAGGTAGAGTTATACTAACTGCTATTGAGATTAATGGTACTCATAGGGCTTTTCTTAATGGTACTCAATCTCAAGTTGGTCAATTTACTGCATTTTTTGAAGATCCGCCTATTGGTAGGGCAGGTGCAGAAGTAGGTCTTACGTCAGCTTTTGCATCAGGTAACAGCTTAGCACATGGCACTTATATTTATAACTCTGGTTTAGGGCATGAAGAGTCAATTGCTAGACAGGGTACAGGTGGTACCATATCTCAAGCCTCTGGGTTTAATTTATATAGGCCGGGAGGAGCATATGCTGGTGAGGCTATAGGTAGGGCATGGACTTTAGCAGGATTTCCAGCAGGAGCGTCTACAGTACCTATAGATGGTGGTAATGCTGACTACTGGCACCCTAATTGGCAAGCTCCTATAGGGGCCGCCCATAGAGGGCATAATTGGTTTTACGTTTGTAACTCTAATATACGAGGTTACGTAGGTAAAAAGGGCACAGTACCATATAATGTTAACTTATTGTATCAATCTCCTACTTACCCTGATAAGGTTTATATATGCAAAGGTTCAACATCTAATCTAGCGGCACAGGCCGCTAAGAAAGTGTATGTGCAGGATGGTTATAATATTACACCTACCAAAGTTATTTGGTATGTACTTAATTTGAGATATTCTAATGGTAATATGGGTGTATCTGGTAACCCATTTACCGGATCAGATATACTTATAACTCCATCTAATTTTACCATAAAAGGGGTTAGTTTACCAAATACTGGATATAAGTTTATTAACCAAAATGCTTTTGGTAACTTAGGTTACAGACCAGATATGGAGTACATTGGAAATAACGCAGCGTACACTGGAGCCTTCGGGGATACTACTGCACGCTGTGAAATTGTAGGATCTAGTAATGGATCTTTATGGTCTCCTGTAGATTATGGAGGGGCTAAGTCTCAGATTAGTATTTACAAATTCGGAGCGGGTAAGCAATGGTACGTAAACTCAAGTAATAACACTATCGGTAATGAGCATGGAGCTGTGTGGAGTCCTAGTACTGTACCCTTAAGACTATTTCCTAATAATGTTGCTAGTACCTACGTTGGTGATGATATAACTCCAACATATCCTGGAGCAGGTAATTACTATAGAGCTTTGGCCACCATAGGATTAGGATTGCCTAATGCTAACGCAACAGTAATATTAACTACTGAAGTTATCATGGGGAATATTAATACCGCAGGAGGAGCTATACGCACATATGGTGGTGTTGCTTGGCAAGTACAAGGAAGAAGACAGCATAGTTACACGGAAGGTGATGGAATATTCCATCAAATATTAACCTTACCTCCTGGATACTTAGTCCCTTATCACTCCACTACTGCATACAGTTATACTCAAACTTGGGCAAGTAGACCTGATGAGTTAACATTTAGAAGAAACGGATATATTTATACTATTAAAAATCTAGGAAATGGTAATGCTGAATTGGGCGTAATTATTCACGCTGATGAGGCTGCAGCTATTTTCCTACCGAGATTAAGAGTAACAGTTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f250f477f0ca33aa5ff0eac610f7d7181ebfb00b5e3387a9c4f6279c56af4039
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2518
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative analysis of effectiveness for phage cocktail development against multiple Salmonella serovars and its biofilm control activity Ribeiro,J.M., Pereira,G.N., Durli,I., Teixeira,G.M., Bertozzi,M.M., Verri,W.A., Kobayashi,R.K.T. and Nakazato,G. — — GenBank