Protein

View in Explore
Genbank accession
QZI86711.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNVQIVGTMLDPSGGEPAGGAMIQFIALAPYAGVAKGAQSIQTTSATGEYDFPLNYGRYAVAINHSGRFVNQAVSVSVNEESPATMDLDTLFESTVPLTPPEFAYLEELLAKAEQAVVDAEGFAGDAANQVSLAEGEVVKATNQANIATIEADRAKTEADRAAEVTGLDTVEQAVDMALGELAGLMTESEARAINRINEAKYDASGFVNSGKYGANNINEGLYVDGVTPDTLFLGGGSSGSSETDYAVFHIASAVMNAIHNNNQFKFEFSPAEDGKRTYNKTTGESIVHPDVATAFALAASDVNIEVVTHRVDLPAVEYYEEELTGVQEVMDNIQSTSTTFGNTDVPTVLSTRKLSYFQQYDGQFPEVTADPDFINDRYRCVVWPNLTDEQKRKVAAYMGEKLFVGVNGNIINGRLGATTIRGLGNGDWHNIESTKGNLEFKSGIPVLSRNGNPYVQDKNNKGVFTDENGCHLYVVATVPRANKGIYAEGLNEYGTAKCSDDKFWYESANKPTTLAECFTGQVGGDIASGKSGHPDGIFYDGIEAGGLNGVIDWRLGAVANDSPEEAAKVEAKVENGTYRGLEKLVRTVVEKNDSTYTLTKSATATTYKQQSIVFNCGLGTTTATYNDDYKYVILKGDNGNVRVVERDLNGADDGMSTHDAAVPYTDGYVYLTNNVNNDDLISSFNTEFPNGTTIDFYYVTESELNLSVSGEFNTQMVIGDPANILLTDALKDGWLGTWCNVIPDGTQLWFPYSRKFVGDTSSSSARRTYTVDGGVTWIEGGLTFDSTLNAYRSAADANYVGLHSYRAFANQTKPSENKRVYNGKAGLMSVFSTMANQQSTLSETLIGKVLKSSGVNLPYGATNSLTDFTIIDAGYASNESLWGKLGEIAGQFPNHTKLRLGAPINDSPAIKVLPYQISNNGKGSIGYQANELTWDATKATPDDATAADGSSFTAWVVGETYKIAGGQFSGKVLQCVGSLSVVLDGYIFEGKDGLYLGSTGALRFKPYTLTTGWGDDDTIKVTAEGSDTFVDTNGIINESVVHEL
Physico‐chemical
properties
protein length:1045 AA
molecular weight: 112200,59290 Da
isoelectric point:4,54350
aromaticity:0,09474
hydropathy:-0,29043

Domains

Domains [InterPro]
IPR013784
STR
4–88
IPR013784
G3DSA:2.60.40.1120
STR
5–90
G3DSA:2.60.40.1120
DC_1387
STR
21–1045
DC_1387
QZI86711.1
1 1045
Architecture
STR
STR 4-1045
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 82E32.1
[NCBI] 		2859294 No lineage information
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86711.1 [NCBI]
Genbank nucleotide accession
MW865342.1 [NCBI]
CDS location
range 3166 -> 6299
strand +
CDS
ATGAACGTTCAAATTGTAGGAACAATGCTAGACCCTTCAGGTGGCGAACCTGCTGGTGGAGCGATGATTCAATTCATTGCTTTAGCGCCTTACGCTGGAGTCGCAAAAGGGGCTCAGTCAATCCAAACAACATCGGCAACAGGTGAGTATGACTTTCCTCTGAATTATGGCCGTTACGCAGTGGCAATTAACCACTCGGGCAGATTTGTTAATCAAGCAGTGTCAGTGTCGGTGAATGAAGAATCACCAGCAACCATGGATCTTGATACTCTGTTTGAGTCTACGGTTCCACTAACTCCGCCAGAGTTTGCGTACTTAGAAGAGTTACTAGCAAAAGCTGAACAAGCAGTTGTTGATGCTGAAGGCTTTGCTGGTGATGCTGCTAATCAGGTTAGCCTTGCTGAGGGTGAGGTTGTCAAGGCTACCAATCAAGCCAACATCGCCACCATCGAAGCTGACCGTGCCAAGACCGAGGCCGATCGCGCAGCTGAGGTGACTGGTCTAGATACTGTAGAGCAGGCTGTTGATATGGCTCTAGGTGAGCTCGCAGGCCTAATGACTGAGTCAGAAGCTCGTGCAATCAACCGCATTAACGAAGCTAAGTATGATGCTAGTGGTTTTGTGAATTCAGGAAAGTACGGCGCTAATAACATCAATGAGGGGCTTTATGTTGACGGGGTTACTCCTGACACTTTGTTTCTTGGCGGCGGCTCAAGTGGCTCTAGTGAAACTGATTATGCTGTTTTCCATATCGCTAGCGCTGTAATGAATGCAATTCATAATAATAATCAGTTTAAGTTTGAATTTTCACCAGCTGAAGACGGTAAACGCACTTACAATAAAACAACAGGTGAAAGCATTGTGCACCCTGACGTTGCTACAGCGTTCGCGCTAGCGGCATCGGATGTTAACATTGAAGTAGTTACGCATCGCGTAGATCTTCCGGCGGTGGAATACTACGAAGAAGAACTTACAGGTGTGCAAGAAGTGATGGATAACATCCAATCGACTTCTACTACGTTTGGCAATACCGATGTACCAACAGTTCTATCAACTCGCAAACTATCTTACTTCCAACAGTATGACGGACAATTTCCAGAAGTAACGGCAGACCCTGATTTCATCAATGACCGATACCGTTGTGTTGTGTGGCCTAACCTAACTGATGAGCAAAAGCGCAAAGTTGCTGCTTATATGGGGGAGAAGCTGTTTGTTGGTGTTAACGGTAATATTATCAATGGCAGATTAGGGGCTACCACAATTCGAGGTCTTGGAAATGGCGACTGGCACAACATTGAATCAACCAAAGGCAATCTTGAATTTAAGTCTGGTATTCCTGTTTTATCCCGCAATGGTAATCCATACGTGCAAGATAAAAATAACAAAGGCGTATTTACCGATGAAAATGGATGCCACCTGTATGTAGTAGCTACCGTACCTAGAGCGAATAAAGGAATTTACGCAGAGGGGCTGAATGAGTACGGTACAGCAAAATGTAGCGATGATAAATTCTGGTATGAGTCAGCAAACAAACCAACAACATTAGCTGAATGCTTTACTGGTCAGGTTGGTGGTGATATTGCTAGTGGTAAATCAGGCCATCCAGACGGTATTTTCTACGACGGTATTGAAGCAGGTGGTTTGAATGGCGTTATTGATTGGCGCCTAGGTGCTGTGGCTAATGATTCACCAGAAGAAGCCGCTAAGGTAGAAGCTAAGGTGGAGAATGGTACTTATCGCGGGTTGGAAAAGTTGGTTCGTACTGTTGTTGAGAAAAATGATTCAACATATACGCTCACTAAATCTGCAACAGCTACAACCTACAAGCAACAATCTATTGTATTTAATTGTGGGCTAGGGACAACAACAGCGACATACAATGATGATTATAAGTATGTAATTCTTAAAGGTGATAACGGTAATGTTCGGGTTGTTGAGCGCGATTTAAACGGTGCAGATGATGGAATGTCGACCCATGATGCAGCAGTCCCATACACTGATGGCTATGTGTACCTAACGAACAACGTTAACAACGATGATTTGATATCTTCGTTTAATACTGAATTTCCTAACGGAACAACAATAGATTTTTACTATGTTACTGAGTCGGAATTAAACCTATCAGTATCAGGTGAGTTCAATACTCAAATGGTTATTGGTGACCCTGCTAACATCCTGCTAACTGATGCGCTTAAAGATGGCTGGTTGGGAACTTGGTGTAATGTTATTCCTGATGGCACTCAGTTGTGGTTCCCTTACAGCCGTAAGTTTGTGGGGGACACATCAAGCTCATCAGCAAGACGCACTTACACAGTGGATGGCGGAGTGACGTGGATCGAGGGAGGGTTAACGTTTGATAGCACCCTGAATGCCTACCGAAGTGCTGCTGATGCAAACTACGTAGGATTACATAGTTACAGAGCATTCGCCAATCAAACCAAGCCAAGCGAGAATAAGCGCGTTTACAATGGTAAGGCTGGGTTGATGAGTGTGTTTAGTACAATGGCGAACCAGCAAAGTACATTGTCTGAAACTCTAATAGGTAAAGTTCTAAAATCTAGCGGGGTTAACCTACCTTACGGAGCCACTAACTCACTAACAGACTTCACCATCATTGATGCTGGGTATGCTAGTAACGAAAGCCTTTGGGGTAAGCTTGGGGAGATTGCAGGCCAATTCCCTAACCATACGAAACTTAGACTGGGGGCTCCGATCAACGATAGCCCTGCGATTAAAGTCCTACCGTACCAAATCAGCAATAACGGTAAGGGTAGTATTGGGTATCAGGCCAATGAGTTGACTTGGGATGCTACAAAGGCAACACCAGATGACGCAACAGCGGCAGATGGAAGCAGTTTTACTGCTTGGGTCGTTGGTGAAACATATAAGATTGCAGGCGGTCAATTCAGTGGCAAGGTTCTTCAATGCGTGGGGTCTTTGAGTGTTGTACTCGATGGTTACATCTTTGAGGGCAAAGACGGCCTATATCTAGGGTCAACAGGTGCATTGCGCTTTAAGCCTTACACCTTAACTACCGGTTGGGGCGACGACGATACAATCAAGGTGACTGCGGAAGGTAGTGACACTTTTGTGGACACAAACGGCATTATCAACGAATCAGTGGTTCATGAGCT

Genome Context

Genome Context

Tertiary structure

PDB ID
517300c19307175a9e2f500108c80c6ec3bb1d60b8b6946135db7d0c83f4eff8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8309
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank