Protein
View in Explore- Genbank accession
- CAK6596935.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTSP
- Protein sequence
-
MADLSISIISDQASESNQAGWWHPLDSFQGVEYYGLCKEYGTVDYHQVEIVRRDADGTLTRGMCKNVDGTVAEFKNDVGHNQPSVVVDGAGYIHVFTSMHVNLLRYFRSARPGDVSQMVDATLDFPDVDWVWTYPITGRGPDGDAYCMMRVASRSTVGENKRAGILYRFDVGSLRWVRYAHVAETADRAIYPDDMAIDEDGVHLLFQWSAYPSSAVRHVGEYGIIGTDGLMRAVNNTPLPMPVAQGQLAYKPLQPGENPAISDGLKIGIQSAKFALNNGGLSHITYRFRTVDDPTGTWFGKFGVYVATWSGSSWNEELIAYVPPEQGNTSAALATTAQGGKRRVYFSVEYTSSGNTVAVIVLAENAGSGWVYSVLGNSAPTLLRLGSAPGNGGDVLYVSAPFEAKVYRYFVPEDYFPAQQFTNFDELLLTLT
- Physico‐chemical
properties -
protein length: 432 AA molecular weight: 47379,42830 Da isoelectric point: 5,00362 aromaticity: 0,11806 hydropathy: -0,18310
Domains
Domains [InterPro]
PF15892
STR
77–315
STR
77–315
1
432
Architecture
STR 77-315 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
432
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 244 | 244 | 0,2534 |
| Central domain | 245 | 421 | 178 | 0,2052 |
| C-terminal | 422 | 432 | 10 | 0,1578 |
Note: Constraints were applied during segmentation.
Fixed 78 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 78 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-244
1-244
Central
245-421
245-421
C-terminal
422-432
422-432
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Klebsiella phage vB_Kpn_K21lambda1 [NCBI] |
3071660 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAK6596935.1
[NCBI]
Genbank nucleotide accession
OY978848.1
[NCBI]
CDS location
range 20519 -> 21817
strand +
strand +
CDS
ATGGCTGATTTGTCGATTTCGATCATTTCAGACCAAGCATCCGAGAGCAATCAGGCGGGGTGGTGGCACCCCCTTGATTCCTTTCAGGGGGTGGAGTACTACGGTCTGTGCAAAGAGTATGGCACCGTCGACTATCATCAGGTTGAGATAGTTCGTCGTGACGCCGATGGCACACTCACACGGGGGATGTGCAAGAACGTAGACGGGACAGTCGCGGAGTTTAAAAATGACGTGGGCCATAATCAGCCATCTGTGGTTGTGGACGGTGCAGGGTATATCCACGTATTCACGTCGATGCACGTTAACCTGCTGCGGTACTTCCGTAGTGCACGCCCCGGTGATGTGTCACAGATGGTAGATGCTACCTTAGACTTCCCGGACGTGGATTGGGTGTGGACGTATCCAATCACCGGGAGGGGCCCAGACGGCGACGCATACTGCATGATGCGGGTGGCCAGCCGAAGCACTGTTGGGGAGAACAAACGCGCGGGCATCCTTTATCGCTTTGACGTCGGCTCTCTGCGATGGGTCCGTTATGCGCATGTGGCCGAAACAGCCGACCGTGCCATTTACCCGGACGACATGGCCATCGACGAGGATGGTGTCCACCTTCTGTTTCAGTGGTCGGCCTACCCGTCGTCCGCTGTGCGACACGTTGGTGAATACGGCATAATCGGCACCGACGGGCTGATGAGAGCGGTAAACAACACGCCTCTACCGATGCCAGTGGCGCAGGGGCAGTTAGCATATAAGCCATTGCAGCCGGGCGAAAACCCGGCGATAAGCGACGGACTGAAAATAGGGATTCAGTCTGCGAAGTTTGCGCTTAACAACGGTGGGTTATCACATATCACCTATCGTTTCAGGACCGTGGACGACCCCACTGGGACTTGGTTCGGTAAATTTGGGGTCTATGTTGCCACGTGGTCGGGTTCCAGCTGGAATGAGGAGCTGATCGCATATGTTCCTCCAGAACAGGGAAACACCTCGGCAGCGCTGGCGACCACGGCGCAAGGCGGGAAACGGAGGGTGTATTTCTCGGTTGAGTATACGTCTTCCGGGAACACCGTCGCTGTCATCGTCCTAGCGGAAAATGCTGGCTCCGGGTGGGTTTATTCGGTGCTTGGCAACAGCGCTCCCACACTCTTGCGACTGGGGTCTGCACCGGGCAACGGTGGCGATGTGCTTTACGTTTCAGCACCGTTTGAGGCTAAAGTATATCGTTATTTTGTGCCAGAAGACTACTTCCCAGCGCAGCAGTTCACTAACTTCGACGAACTACTGCTTACTCTGACCTAG
Genome Context
Genome Context
Tertiary structure
PDB ID
1dddfb18d62f546f0cd3d0cf44e004159c58770e158faff07601e35fac867284
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50