Protein

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Genbank accession
XLQ98279.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MQTIDDGDHSNANRIVNNTIENCTRYGIVVYNNLETKTGTLTNTLVQGNTIKNIYGNVLNTTTQTYTYGSGIYILSAEGIKVIGNTIDLTNQNTDSTTLSPACIGVNATSEAIISNNIISRGAYYGIMISDALQQGVGTNANSESFKPNSTVVVANNIIKACSRSGLYIFNHHNVKCVGNITISNTQNGVLTGADNALYPTLNNIEILSHTSRENTMAGLSITKCDTPTIDVSECKDNSGDGIYCSSINAVIKVGSVIRNNRGIVIAASGCSIMGGRVTGNTTGILSTLSYKLISAYVAGNTTDYSGDFGPILSYKGNSTPSVKDRDTIILSDATTITDFTDGVLGQTIKIRATVNGTVISHNSSGIRLKGNTSFSMQAGETLTLTKFYTNQWDEISRKTVTE
Physico‐chemical
properties
protein length:403 AA
molecular weight: 42854,38320 Da
isoelectric point:6,22247
aromaticity:0,05707
hydropathy:-0,13524

Domains

Domains [InterPro]
IPR012334
STR
8–217
IPR012334 IPR006626 IPR006626
IPR006626
Unmapped
10–32
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_1714
IPR011050
STR
10–193
IPR011050 IPR006626
IPR039448
ENZ
12–204
IPR039448
XLQ98279.1
1 403
Architecture
STR
RBD
STR 8-217 | RBD 218-403
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLQ98279.1
1 403
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0039
Central domain 11 308 299 0,9970
C-terminal 309 403 94 0,9825
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-308
C-terminal
309-403

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage cardinal
[NCBI] 		3384775 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ98279.1 [NCBI]
Genbank nucleotide accession
PQ567651.1 [NCBI]
CDS location
range 145525 -> 146736
strand -
CDS
TTGCAAACAATTGATGATGGGGACCATTCTAATGCCAACAGAATAGTTAACAATACTATTGAAAATTGTACGCGGTATGGTATAGTCGTTTATAACAATCTGGAAACAAAGACAGGGACACTCACCAATACATTGGTACAAGGGAACACCATTAAGAATATTTATGGTAATGTTCTTAATACCACAACCCAAACATATACTTACGGATCAGGGATATACATTTTGTCTGCCGAAGGTATCAAAGTGATTGGGAATACCATAGATCTCACAAATCAAAACACCGATTCTACGACACTTTCACCAGCGTGTATTGGTGTGAACGCAACATCTGAAGCCATTATTTCCAATAATATAATTTCTCGTGGGGCTTATTATGGGATTATGATTTCAGATGCACTACAGCAGGGGGTAGGGACTAACGCCAATTCTGAATCATTTAAACCAAATTCTACTGTCGTTGTTGCTAACAATATTATTAAAGCATGTTCCCGTAGCGGGTTGTATATCTTTAATCATCATAATGTTAAATGTGTGGGTAATATCACTATTTCCAACACACAAAATGGGGTTCTCACAGGTGCTGATAATGCGTTATATCCAACTTTAAACAATATTGAAATTCTTTCGCACACTTCCAGAGAAAATACTATGGCTGGTCTGTCAATAACAAAATGTGATACCCCTACGATTGATGTATCAGAATGTAAGGATAATTCGGGAGATGGAATCTATTGTTCTTCAATAAATGCTGTTATCAAAGTGGGGAGCGTAATTCGGAACAACAGAGGGATCGTGATTGCAGCTTCCGGTTGTTCAATAATGGGCGGTAGAGTCACAGGGAATACTACAGGAATATTATCTACTCTTAGTTATAAGTTGATTTCTGCTTATGTAGCTGGTAATACTACAGATTATTCTGGGGATTTCGGTCCAATTTTGTCCTACAAAGGTAACTCTACACCATCAGTCAAAGACAGAGATACGATCATCCTGAGCGATGCCACTACCATAACCGATTTCACTGATGGTGTGTTGGGCCAGACAATTAAGATTAGGGCCACAGTTAATGGAACGGTTATTTCTCATAATTCATCCGGTATACGTCTTAAAGGGAATACCTCATTCTCTATGCAAGCTGGAGAAACATTGACGTTAACTAAATTTTACACGAACCAATGGGATGAAATATCTAGAAAAACCGTAACCGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c060ab7e9780a444c5f089efbddec77806dc59deea43b3249adf915977ecb34
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8688
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50