Protein

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Genbank accession
YP_012787117.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSRNLMPKSGAMAPYVVVNRDAAVAGVFSVDGEAGAVVLTSKYLQISKYTADKAVTDASITSINESIGNINTALGGVNTSLSNKAAKGANNDITELNALTKAITIAQGGTGATTLDEAKQALQVERLRQQDNGTFVTSPNGKYSFFIYNSGDFGLVDSATAAVSAMKVAFGGTGGTTPKDARKSLNIPVGALAEVIPNGENILNYVAVAGQSGYYSSGELVVNGPPKQEGWWTYNFHCHGVDINGAAQYGVLRVVGLSGSSWINVLDGTGNWRGWQEQFNLQSTVPLTNGGTGANSVEGAKINLGIERFKQTAAETMIYAPGSPYRITARPNGEWGYWRDDNGSWIPLPIAAGGTGGNTPTQVRTNLELTEWGLLPSMSGKYPGGFNFDNLVVNSTFTVPPTPGSNITGVRPFQQVAGLDDGWFYLETLVHPDTGYAMQRATQMTGAWAGSVSIRVKQGGTWSVWKQASANFGLLATPVGNRATFRSSGTATGGSGCLVGGQISGGSFTSWRDRPCGVLVEHETTDAAYAIWKSVKWGVDWISGMDAVMWSAGGAQLNLYCKGAEYRFDSAGAAAAGSWVSTSDIRMKANLQKIDTARDKLKSLVGYTYYKRNKLEEDKDTIYSIEAGVIAQDVQSVLPEAVYKIEPQKEDSMLGVSHAGVNALLVNAVNELSEIVDQQKQEIDELKKLVKQLLAK
Physico‐chemical
properties
protein length:696 AA
molecular weight: 74015,13100 Da
isoelectric point:5,92014
aromaticity:0,08764
hydropathy:-0,20216

Domains

Domains [InterPro]
DC_0195
STR
2–696
DC_0195
IPR030392
CHP
583–683
IPR030392
IPR030392
CHP
583–643
IPR030392 Coil
YP_012787117.1
1 696
Architecture
STR
STR 2-696
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012787117.1
1 696
Domain Start End Length (AA) Confidence
N-terminal 1 311 311 0,6618
Central domain 312 510 200 0,1359
C-terminal 511 696 185 0,9655
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-311
Central
312-510
C-terminal
511-696

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_UTK0009
[NCBI] 		3028908 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus UTK0009
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012787117.1 [NCBI]
Genbank nucleotide accession
NC_111487.1 [NCBI]
CDS location
range 84413 -> 86503
strand -
CDS
ATGTCACGTAATTTAATGCCAAAATCTGGCGCAATGGCGCCTTACGTTGTAGTTAACAGAGACGCAGCAGTAGCTGGTGTTTTCTCTGTTGATGGGGAAGCTGGTGCTGTTGTACTAACTTCCAAATACCTACAAATATCTAAGTATACTGCTGATAAGGCAGTTACAGATGCTTCTATTACTAGCATTAATGAATCAATTGGAAATATTAATACTGCATTAGGAGGAGTTAATACCTCTCTAAGTAACAAAGCAGCTAAAGGAGCTAATAACGATATTACAGAATTAAACGCTCTGACAAAAGCTATTACTATTGCTCAAGGTGGTACAGGAGCAACTACACTTGATGAGGCTAAGCAGGCATTACAAGTTGAGAGATTAAGACAACAAGATAATGGTACTTTTGTAACTTCTCCTAATGGTAAATATTCTTTCTTTATTTATAATAGTGGGGATTTCGGATTAGTAGATAGTGCTACAGCTGCGGTATCTGCTATGAAAGTAGCTTTTGGTGGTACTGGTGGTACTACTCCGAAAGATGCTAGGAAAAGCCTTAATATTCCTGTAGGTGCTCTTGCTGAAGTAATCCCTAATGGTGAAAATATTTTAAATTATGTAGCAGTTGCAGGTCAGAGTGGTTATTACTCATCTGGAGAATTAGTAGTTAACGGACCTCCTAAACAGGAGGGATGGTGGACCTATAATTTCCACTGTCATGGTGTGGATATAAATGGGGCTGCACAATATGGAGTATTACGGGTGGTGGGACTATCTGGTAGTTCCTGGATAAATGTGCTAGACGGGACTGGTAACTGGAGAGGTTGGCAGGAGCAATTTAACCTACAATCTACTGTTCCCCTCACAAATGGAGGTACGGGAGCTAATTCAGTAGAAGGTGCCAAGATTAACCTTGGAATTGAGAGGTTTAAGCAAACAGCAGCAGAAACTATGATATATGCTCCGGGATCTCCCTATAGGATTACAGCTAGACCTAATGGAGAATGGGGTTATTGGAGAGATGATAATGGTAGTTGGATACCTCTCCCTATAGCTGCTGGAGGTACAGGCGGAAATACCCCTACCCAAGTTAGAACAAATCTTGAGTTGACAGAGTGGGGTCTTTTACCCTCTATGTCTGGTAAATACCCAGGAGGATTTAACTTTGATAACCTAGTAGTGAATAGTACATTTACGGTACCTCCTACTCCTGGATCTAATATTACAGGTGTGAGACCTTTTCAGCAAGTAGCAGGCCTAGATGATGGTTGGTTCTATCTAGAAACTTTAGTACACCCAGATACTGGATATGCTATGCAGCGTGCTACCCAAATGACCGGAGCTTGGGCAGGTTCAGTTTCAATACGTGTTAAGCAAGGTGGTACTTGGAGTGTTTGGAAACAGGCTAGTGCGAATTTTGGTCTACTTGCTACTCCTGTAGGCAATAGGGCTACTTTTAGAAGTTCAGGTACTGCAACTGGAGGATCAGGTTGTCTAGTAGGTGGTCAGATTTCTGGAGGATCTTTCACTTCCTGGAGGGATAGACCATGCGGTGTACTAGTGGAGCATGAAACTACTGACGCAGCCTACGCTATATGGAAGAGTGTTAAGTGGGGAGTAGATTGGATCTCTGGAATGGACGCAGTTATGTGGTCCGCTGGTGGCGCTCAACTTAATTTATATTGTAAGGGGGCTGAGTATCGTTTTGATAGTGCAGGAGCTGCTGCAGCAGGTAGCTGGGTTAGTACTTCAGATATTCGTATGAAGGCTAATCTACAGAAAATAGATACTGCGCGTGATAAACTTAAGTCCCTTGTAGGCTATACATACTATAAGAGAAATAAACTTGAGGAAGACAAAGATACTATATATAGTATTGAAGCTGGTGTTATTGCTCAAGATGTACAGTCTGTTCTTCCAGAAGCAGTATATAAGATTGAACCACAAAAAGAAGATAGTATGCTTGGTGTATCTCATGCTGGAGTCAACGCTCTTCTAGTTAACGCTGTAAATGAGCTTAGCGAAATTGTTGATCAGCAAAAGCAAGAGATTGATGAACTCAAGAAATTGGTAAAACAGTTACTTGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b93429cfd865fe056807cefe4a43677c946cd958877bf54a17cc1dfcb581ea65
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7069
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Bryan,D.W., Hudson,L.K., Wang,J. and Denes,T.G. — — GenBank