Protein

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UniProt accession
A0A8S5UET6 [UniProt]
Protein name
Pulmonary surfactant-associated protein D, c-type lectin, alpha-helical coiled
RBP type
TSP
Evidence RBPdetect
Probability 0,62
Protein sequence
GPQGEKGEKGDTGSAGADGKDAPQIDDNTVTDSNPWSSKKIIDMLCPALEESGNPVTCEPVAGYPLGVVASWEPTQAGSGDPSPDNIRPIKGRDSVSVERCGVNLLNPKENAHRTYTPYGLTITYIGDNKVHLSGTYEEDGGSFAILDTQQKLLTGKGLRITGFTIDGTKQSYTLYGLRTKDETVIAMMAAFTKGDAIDMTVAIVVSGTTAPTTYSPYKGDTLDLQLPGTVYGGDVDAVIGEGKCTAKVITLDGISQRFTSSPSGAYWNMEFNSVPGIDKIIATSHFAKTYFGVNKSYDFVFTDPKTMENLFASVDELNAYLAAQAAAGTPVQIVYKLKTHTPIHATGAQPIPALAGCNTVLTDADSVAVTGRADPAHAIAALQAQLTVATQALAETQAAVVDTTAAIEQDCDAIGGGEDADAE
Physico‐chemical
properties
protein length:424 AA
molecular weight: 44359,92270 Da
isoelectric point:4,54907
aromaticity:0,06604
hydropathy:-0,19882

Domains

Domains [InterPro]
DC_0150
STR
1–382
DC_0150
Coil
Unmapped
380–400
Coil
A0A8S5UET6
1 424
Architecture
STR
STR 1-382 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5UET6
1 424
Domain Start End Length (AA) Confidence
N-terminal 1 103 103 0,7434
Central domain 104 316 214 0,7308
C-terminal 317 424 107 0,0821
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-103
Central
104-316
C-terminal
317-424

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctN5F10
[NCBI] 		2825465 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF93007.1 [NCBI]
Genbank nucleotide accession
BK016078 [NCBI]
CDS location
range 14572 -> 15846
strand -
CDS
GGCCCGCAGGGGGAAAAGGGCGAGAAAGGCGACACCGGGTCTGCGGGGGCTGACGGCAAGGACGCGCCGCAGATCGATGATAACACGGTGACGGACAGCAACCCGTGGAGCAGCAAGAAGATCATCGACATGCTGTGCCCTGCCCTGGAAGAATCCGGAAACCCGGTGACCTGCGAGCCTGTAGCGGGGTATCCGCTGGGGGTGGTGGCATCGTGGGAGCCCACCCAGGCGGGCAGCGGCGACCCCAGCCCGGACAACATCCGGCCTATTAAGGGCAGAGACAGCGTGAGCGTGGAGCGGTGCGGGGTGAATCTGCTGAATCCAAAAGAGAACGCCCATAGAACATATACTCCGTATGGCCTAACGATAACTTATATTGGGGATAACAAGGTTCATTTAAGTGGGACTTACGAAGAAGACGGCGGCAGCTTTGCCATCCTTGACACTCAGCAAAAACTTCTTACGGGAAAGGGGCTGAGAATCACCGGATTTACGATAGATGGAACAAAGCAAAGCTACACACTTTACGGACTAAGGACAAAAGACGAAACCGTTATTGCTATGATGGCAGCGTTTACAAAAGGCGATGCCATTGATATGACTGTCGCTATTGTCGTGTCCGGCACCACCGCCCCGACCACCTACTCTCCATACAAGGGCGATACGCTGGATTTGCAGCTGCCTGGGACGGTTTACGGCGGGGATGTAGATGCGGTGATCGGAGAGGGGAAATGCACCGCTAAGGTAATCACATTAGATGGTATCAGCCAGCGGTTTACGTCATCACCGTCCGGAGCATACTGGAATATGGAGTTTAATTCGGTGCCCGGAATCGATAAAATTATCGCAACAAGTCATTTTGCAAAAACATATTTTGGCGTAAACAAAAGTTATGATTTTGTTTTTACCGACCCGAAAACAATGGAGAACTTGTTTGCATCAGTGGACGAATTAAATGCCTACCTCGCCGCCCAGGCCGCAGCCGGAACGCCGGTGCAAATTGTGTACAAGCTGAAAACCCACACCCCCATCCATGCCACGGGCGCACAGCCCATCCCGGCACTGGCGGGGTGCAATACGGTGCTGACGGATGCGGACAGCGTGGCTGTGACGGGCCGGGCTGACCCGGCCCACGCCATTGCGGCGCTGCAAGCACAGCTGACCGTTGCCACGCAAGCCCTGGCGGAGACCCAGGCGGCGGTGGTGGACACCACGGCTGCTATTGAGCAGGACTGCGATGCAATTGGAGGAGGTGAGGACGCGGATGCTGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d06731a42c4411987f989b0e5773cd094051c509be9a660ddc5488608736439c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9063
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50