Protein

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Genbank accession
APC45944.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAQVKISALTPADPLTGSEELPLVQGGVTKRAPIENLDTLRQWFQLLEPASAAGALDIDLARPAGFHVTLTEDVTTLTFSNVPSGRFVEFTAAFQQDATGGWSITFPASVQNPPTIAAAADALTIARFATWDGGATIHTLSTV
Physico‐chemical
properties
protein length:143 AA
molecular weight: 15021,73450 Da
isoelectric point:4,49405
aromaticity:0,07692
hydropathy:0,16783

Domains

Domains [InterPro]
DC_1062
RBD
12–143
DC_1062
IPR058970
RBD
67–127
IPR058970
APC45944.1
1 143
Architecture
RBD
RBD 12-143
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Halomonas phage QHHSV-1
[NCBI] 		1913108 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Halomonas ventosae
[NCBI] 		229007 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Oceanospirillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APC45944.1 [NCBI]
Genbank nucleotide accession
KX879752.1 [NCBI]
CDS location
range 17159 -> 17590
strand -
CDS
ATGGCACAGGTAAAGATTTCCGCACTGACGCCAGCCGACCCGCTCACCGGCAGCGAGGAGCTGCCGCTGGTGCAGGGCGGGGTGACCAAGCGCGCGCCCATCGAGAACCTGGACACGCTGCGCCAGTGGTTCCAGCTGCTGGAACCGGCCAGCGCCGCCGGGGCGCTCGACATCGACCTGGCCAGGCCGGCGGGCTTCCACGTCACGCTGACCGAGGACGTCACCACCCTGACCTTCAGCAACGTGCCGTCCGGTCGTTTCGTCGAGTTCACCGCGGCCTTCCAGCAGGACGCCACCGGCGGCTGGTCGATCACCTTCCCGGCCAGCGTGCAGAACCCGCCGACCATCGCCGCGGCCGCCGACGCCCTGACCATCGCCCGCTTCGCCACCTGGGACGGCGGCGCCACCATCCACACGCTCTCGACCGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e5f1bc4f78ddb30b4483922f0f1f44f6035e6c97a2f472b67b0ea6f2800a5ee8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8372
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Halomonas ventosae virulent halovirus QHHSV-1 Fu,C., Bai,M., Zhao,Q., Xiao,W. and Cui,X. 2017 28608126 GenBank