Protein

View in Explore
Genbank accession
WJJ54145.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MISQFNQPRGSTSIEVNKQSIARNFGVKEDEVIYFTAGIDLSGFKVIYNESTQRAYSLPSGIVSGTTAISLDKRAILTHSAGSVDLGELAVSREEYVTLPGSFDTGATLNVKNELLTYTTGKYRWDGELPKVVPAGSTPETAGGIAVGAWVSVGDAALRSDLAKPTGAGLIGFGPTGFSTRIVEDVLTDCITNRSFGAKCNGIDDDTIPNQQALDWSATNKRTVLFIGKTCITSRLVLNSGARMHNIGSIVPKNFTDTVVIEVKDDKWRSPYNDGITAIQTGNRVLIDNLYIEPESSISAVGIYGTDGVGPVINNARIFNMLNGGINIEKGYEWKFNNTVVVAPEDQLGTSGVSGILHRTSDSMYINTTVVGYPVGMEVTSGANDIVNTHVWGLDGIRTTRVMLIGLKLGGSSNNVINYYSDTPHKLDKTQPASIANGGIGYVISGFNNNLVCPRVLFHENDGPKYGKVFYISGTDNSIREPVSSDVSGIEDGGVYVFSGSATPINNTVSGGNLQSFYVFPQSTGFNPTINAPCAYTSQVYRHELTQRSVSGRLTIECNITSNVGSGAFSISLPPYLSSFKGDCTGSIFTILNNTIRADTNLIEVIGYITGGKIFFRKIFRSGSPEDVQITDLITGHASIDLSFTCQL
Physico‐chemical
properties
protein length:648 AA
molecular weight: 69423,14450 Da
isoelectric point:5,42951
aromaticity:0,08488
hydropathy:-0,07531

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–94
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 DC_1603
G3DSA:3.30.2020.50
ATT
1–100
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
IPR040775
RBD
90–155
IPR040775
WJJ54145.1
1 648
Architecture
ATT
STR
ATT 1-164 | STR 172-646 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJJ54145.1
1 648
Domain Start End Length (AA) Confidence
N-terminal 1 207 207 0,9905
Central domain 208 511 305 0,9918
C-terminal 512 648 136 0,9901
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-207
Central
208-511
C-terminal
512-648

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV101
[NCBI] 		3053734 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJJ54145.1 [NCBI]
Genbank nucleotide accession
OQ973471.1 [NCBI]
CDS location
range 144334 -> 146280
strand -
CDS
ATGATTTCTCAATTCAATCAACCACGCGGCTCCACTTCTATAGAAGTTAACAAACAATCTATCGCTCGAAATTTCGGTGTCAAAGAAGACGAAGTCATTTATTTCACTGCTGGTATTGATCTCAGTGGATTTAAAGTAATTTATAATGAGTCTACCCAACGGGCTTATTCTCTTCCTTCAGGTATTGTTTCAGGAACGACTGCGATAAGTCTGGATAAAAGAGCTATCCTCACTCATTCAGCGGGTTCTGTTGATCTTGGGGAATTAGCAGTAAGCCGCGAAGAATACGTAACCTTACCAGGATCTTTCGATACAGGTGCTACCCTTAATGTTAAAAATGAATTACTTACCTATACAACGGGGAAGTATCGCTGGGATGGGGAGCTTCCCAAAGTAGTGCCAGCTGGTTCAACCCCTGAAACTGCTGGAGGTATTGCTGTTGGTGCGTGGGTTAGTGTTGGTGATGCGGCGCTAAGATCTGACCTCGCTAAGCCAACAGGGGCAGGATTAATAGGATTTGGGCCAACAGGTTTTTCAACAAGAATTGTTGAAGATGTATTGACTGATTGCATTACAAACCGATCATTTGGCGCTAAATGTAATGGTATTGATGATGATACCATTCCTAATCAGCAAGCTTTAGATTGGTCAGCAACAAATAAAAGAACCGTATTGTTTATTGGTAAAACATGCATAACATCGCGTCTTGTTTTAAATAGTGGAGCAAGAATGCATAATATAGGGTCTATCGTACCCAAGAATTTTACTGATACAGTTGTTATAGAAGTAAAAGATGATAAATGGAGATCACCTTATAATGATGGTATAACAGCTATACAAACAGGAAATAGAGTCCTTATTGACAATCTTTATATTGAGCCAGAATCGTCAATATCGGCTGTTGGAATCTATGGTACTGATGGTGTTGGACCAGTGATAAATAACGCAAGAATTTTCAATATGCTAAATGGAGGTATTAATATTGAAAAGGGTTATGAGTGGAAATTCAATAATACAGTAGTTGTAGCACCGGAAGACCAGCTTGGAACATCTGGCGTTAGTGGGATATTACACCGTACTTCTGATAGTATGTATATCAATACAACGGTAGTTGGATATCCTGTCGGCATGGAAGTTACAAGCGGAGCAAATGACATAGTTAACACACACGTCTGGGGGTTAGATGGAATTAGAACAACACGCGTGATGTTAATTGGTTTAAAGCTTGGTGGTAGTTCAAATAACGTTATTAATTATTATTCTGACACGCCACATAAGCTTGACAAAACACAGCCAGCAAGTATAGCTAATGGTGGGATCGGATATGTAATATCTGGTTTCAATAACAACTTGGTGTGCCCAAGAGTCCTTTTTCATGAAAATGATGGTCCTAAGTATGGGAAGGTATTCTACATTAGTGGAACGGATAATAGCATTAGAGAACCTGTTAGTTCTGATGTTTCAGGTATCGAAGATGGTGGTGTGTATGTGTTTTCTGGTTCAGCAACGCCAATCAATAATACTGTATCTGGTGGTAACTTACAAAGCTTCTACGTTTTCCCTCAGTCCACTGGATTCAACCCAACCATAAACGCACCTTGCGCATATACTTCACAAGTATATAGGCATGAATTGACTCAGCGCAGCGTATCAGGAAGGTTAACTATTGAATGCAACATAACAAGCAACGTTGGATCCGGTGCGTTTTCAATATCTCTTCCCCCTTACCTAAGCTCATTCAAGGGTGATTGCACTGGCTCAATATTCACAATATTGAATAATACTATACGCGCTGACACCAACCTAATTGAAGTTATTGGGTATATTACTGGAGGTAAAATATTTTTTAGAAAGATCTTCAGAAGTGGATCTCCTGAAGATGTTCAGATAACAGATCTGATAACAGGTCATGCATCAATAGACTTGAGCTTTACTTGCCAGCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
70a276c57410f2834fee81e1a1635fc0cfd7e42ae5457fe70a1bb693e94eb425
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7789
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A diverse collection of bacteriophages to be used for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Soerensen,A.N., Bojer,M.S., Bortolaia,V., Soerensen,M.C.H. and Broendsted,L. 2024-02 — GenBank