Protein

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UniProt accession
A0A8S5N978 [UniProt]
Protein name
YadA-like protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNKLVLATMIMGTIGGNVLASGVVTGPVEPNTQAPVVSGYNSVAVGANTVVTGTNTIAIGRDNKVTGNDSVVIGGGNGTIEADQASVIGYNNYVGNNKEQTVLGANNTVDNQGAIAVGTHSVVRGIDAVVIGNNASAPVQNSVAIGTNSQTDNPVGVRQVVLNGVTHVFAGESPNSVVSFGSKKSDTYSGISNYNRQLHNVSAGRVDPSSLDAVNGSQLFAAYDEIETNGTHIAKLQKDVNCLDKRVTRNTTNISNLTSKVDNGFTTINNTLTATNERVGQNSQAILNNTDRINNHETRITDLERNTVGQISNVMHEVAKAGASNAALSALHYLGYNSDDKLTFAVGYGHYKNANDVALGMFYAPTEHVMFSLGATLANKMINAGVSFRLGKGSEYETNHKGKIKQLEELVNQLVAEVEELKAGK
Physico‐chemical
properties
protein length:425 AA
molecular weight: 44621,00310 Da
isoelectric point:6,06571
aromaticity:0,04706
hydropathy:-0,23035

Domains

Domains [InterPro]
IPR011049
STR
28–102
IPR011049 IPR011049 G3DSA:1.20.5.170 G3DSA:3.30.1300.30 Coil
IPR011049
STR
36–223
IPR011049 G3DSA:3.30.1300.30
IPR011049
STR
36–220
IPR011049 G3DSA:1.20.5.170 Coil IPR005594
cd12820
STR
38–152
cd12820 IPR045584
IPR008640
Unmapped
38–61
IPR008640 IPR008640
A0A8S5N978
1 425
Architecture
STR
RBD
ATT
STR 28-249 | RBD 276-335 | ATT 336-390 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5N978
1 425
Domain Start End Length (AA) Confidence
N-terminal 1 42 42 0,4855
Central domain 43 330 289 0,6337
C-terminal 331 425 94 0,4713
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-42
Central
43-330
C-terminal
331-425

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ct0dB2
[NCBI] 		2826535 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD90802.1 [NCBI]
Genbank nucleotide accession
BK015095 [NCBI]
CDS location
range 30053 -> 31330
strand -
CDS
ATGAATAAATTAGTATTAGCAACAATGATTATGGGTACAATTGGCGGTAATGTATTAGCAAGCGGTGTTGTAACAGGGCCAGTAGAGCCTAACACACAAGCACCAGTAGTAAGCGGTTACAATTCTGTAGCCGTAGGTGCAAATACAGTAGTTACAGGCACAAATACAATTGCAATTGGCCGTGATAATAAAGTAACAGGAAATGATAGTGTTGTAATCGGTGGTGGTAACGGAACAATTGAAGCCGACCAAGCAAGCGTAATTGGATACAACAATTACGTAGGCAACAATAAAGAACAAACTGTATTAGGTGCTAATAATACAGTGGATAACCAAGGTGCAATCGCGGTAGGAACGCACAGTGTAGTGCGTGGTATTGATGCAGTAGTCATCGGTAACAATGCATCAGCACCTGTTCAAAATTCCGTAGCGATTGGCACAAACAGTCAAACGGATAACCCTGTAGGTGTTAGACAAGTTGTATTGAATGGTGTAACTCACGTGTTCGCAGGTGAAAGTCCTAATAGCGTAGTATCCTTTGGTAGTAAGAAAAGCGATACATACAGTGGAATTAGTAACTACAACCGACAACTGCACAATGTAAGTGCGGGCCGTGTAGACCCTAGCAGTTTAGATGCAGTGAATGGCAGTCAGTTATTCGCAGCGTATGACGAGATTGAAACAAATGGAACACACATTGCAAAACTTCAAAAAGATGTGAACTGTTTAGATAAACGAGTAACACGCAATACCACAAATATCTCTAATTTGACCTCTAAGGTGGATAATGGATTTACAACGATTAATAACACTCTAACCGCTACAAACGAGCGTGTAGGGCAAAATAGCCAAGCCATTTTGAATAATACGGATAGAATTAATAACCACGAAACACGCATTACGGATTTAGAACGTAATACAGTAGGTCAAATCTCAAACGTGATGCATGAAGTAGCAAAAGCTGGTGCATCTAATGCAGCACTAAGTGCGTTGCATTACCTAGGCTACAATTCTGATGATAAATTAACATTTGCGGTAGGATACGGCCACTACAAAAACGCAAATGATGTAGCACTTGGAATGTTCTATGCACCAACGGAGCATGTAATGTTTAGCTTGGGTGCTACATTGGCCAACAAAATGATTAATGCAGGTGTATCTTTTAGACTTGGTAAAGGTAGTGAATATGAAACTAACCATAAAGGCAAAATCAAACAACTTGAAGAGTTGGTAAATCAATTAGTAGCGGAAGTTGAAGAATTGAAAGCTGGTAAATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0019867 outer membrane Cellular Component IEA:InterPro (UniProt)
GO:0015031 protein transport Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
e1e0ce6832ba2a3ea06a741190226a3e8029d0d67f3adb19a458a6c9c2ac8ed4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8801
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50