Protein

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Genbank accession
WJZ48560.1 [GenBank]
Protein name
collagen-like protein
RBP type
TF
Evidence RBPdetect2
Probability 0,77
Protein sequence
MSAIDFPNSPTIGDVVVVGSSAWVWNGVVWEIQRITPTGPTGPTGPTGPTGPAVTGPTGPQGEPSNVTGPTGPLGPTGPLGPTGPRGFVGPTGPQGDSGPTGPTGPTGPLGPTGPQGTFTAGPTQPSAESSVDGDVWFDTNSAKTYVYFSGAFVEAAGGTQGPTGPRGSQGSYKISTSWWLGV
Physico‐chemical
properties
protein length:183 AA
molecular weight: 17988,46560 Da
isoelectric point:4,23936
aromaticity:0,08197
hydropathy:-0,32951

Domains

Domains [InterPro]
DC_1431
STR
5–155
DC_1431
IPR050149
Unmapped
37–171
IPR050149
IPR008160
STR
69–117
IPR008160
WJZ48560.1
1 183
Architecture
STR
STR 5-155 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Actinomycetia phage DSL-LC01
[NCBI] 		3058956 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Actinomycetia bacterium
[NCBI] 		1883427 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > unclassified Actinomycetes

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJZ48560.1 [NCBI]
Genbank nucleotide accession
OQ999401 [NCBI]
CDS location
range 119353 -> 119904
strand -
CDS
GTGTCAGCAATTGACTTTCCTAACTCACCAACGATAGGTGACGTAGTTGTTGTCGGCAGCTCTGCATGGGTGTGGAACGGAGTTGTCTGGGAGATTCAGAGAATCACTCCTACAGGTCCTACAGGTCCTACAGGTCCTACGGGACCAACCGGTCCGGCAGTTACTGGTCCTACCGGTCCGCAAGGTGAACCTTCAAATGTTACAGGCCCGACAGGACCTCTCGGTCCGACAGGACCTCTCGGTCCGACAGGACCAAGAGGCTTCGTTGGACCTACAGGACCTCAAGGTGATTCAGGACCGACAGGGCCGACCGGCCCAACTGGCCCTCTCGGCCCAACAGGTCCTCAAGGTACTTTTACAGCCGGACCAACACAGCCTTCTGCTGAAAGTTCTGTTGACGGAGACGTTTGGTTCGACACCAATAGCGCTAAGACATACGTCTACTTTTCCGGAGCATTTGTCGAAGCAGCCGGAGGAACGCAGGGACCGACTGGTCCAAGAGGTAGTCAAGGATCTTACAAGATCTCGACGTCTTGGTGGCTTGGTGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
78296794607a959e212217a536ff88856b526be38973e21455c6b577109a08fc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8083
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50