Protein

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Genbank accession
YP_009790746.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MEFLIPFEYLSRKFVRVALIGRDRKELVVNRDYRYVSATQIRTTKTWQVSEGYEFIELRRHTSATERIVDFKDGSILRAQDLNISTIQALHIAEEARGLAADTLGVNDDGHLDARGRKIVNVANPDSDRDAVNFRFLNEAEKSVTQTLAEVKRLKQDIDAKHTQVGKDTNEVRQVVVTVSQHKVASESARDRAETAASQAEQSASTASTKANQASQSEQNASTSASQASQSATKAEQEANKAQQAANKAIGGAIPNSMKSDNDDSSSSDTVATSYAVKKVRDFAENQFSSLANADGYKHVGRCKSVEMLRKVVPSKHGQRILVDAYYEDSTTGGGEFVADLQDLTTADDGGSCFVVLNNTARWKRIFDDRVDVVDFGAKSGEDATIAFENAFKYAGEHKKIITSEASTYFINKPLFLSGVGGIELNGKLYAKTAPANKSKPIITWAENATTLTQSHNNFINLVMWLDPTEDAPAICLAGLKSTNLKIGETGCVQIYATTEKNEQQVDFKGVEVSSTAYNRFDIDVLSTLHITGKGQGWVNENVINAQRFRALKAGFRAGILIDGEYRHNHNLIRRGCLEGGQTINIENGSSNTIEDARFERNPKNPDELLTISFSENAFSNRIIASWVSSPEFTNTPYGVHYDMVKVTDKGVDNVVSHIQETYSDEVCLFALSQTTSFVSTLNKATFPMKYTTDIEGVNGIKQLISGSFKLLQNYAEVYKQSQFIHVRIGTMFDLSSDASHFRLGVELFDENKAPITTALDSHIKSGQLKVDGNKYKLDRNVSNANFTIISEQVRYVRVLITSGNGTENQVFDYLRFVVRYPKHFIEKSRGYHNIQQPIRKRSLFYRGVDGDIDMAEVGEGVVCYKQDLSEMKINLVRVALVINKIVGKVLIIEGLPVSGIREHTQDSEKGWSLIYQRNDQEHKLAVERVEFLQSEKQTKIHIQGTIPSDLRMGESIVLILTKTKKLA
Physico‐chemical
properties
protein length:968 AA
molecular weight: 107650,52940 Da
isoelectric point:6,55305
aromaticity:0,07748
hydropathy:-0,42221

Domains

Domains [InterPro]
DC_0324
STR
1–675
DC_0324
IPR005604
ATT
2–114
IPR005604 Coil Coil IPR011050 DC_1748
IPR011049
STR
74–172
IPR011049
YP_009790746.1
1 968
Architecture
ATT
STR
RBD
ATT 1-114 | STR 115-675 | RBD 676-965 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009790746.1
1 968
Domain Start End Length (AA) Confidence
N-terminal 1 384 384 0,9955
Central domain 385 654 271 0,9805
C-terminal 655 968 313 0,9131
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-384
Central
385-654
C-terminal
655-968

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage vB_PmuP_PHB02
[NCBI] 		2005054 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Wuhanvirus
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009790746.1 [NCBI]
Genbank nucleotide accession
NC_047831.1 [NCBI]
CDS location
range 4014 -> 6920
strand -
CDS
GTGGAGTTTCTGATTCCCTTCGAGTATCTTAGCCGTAAGTTCGTAAGGGTTGCTCTAATTGGTCGAGACCGAAAGGAACTTGTAGTAAACAGGGATTATCGCTATGTATCCGCTACACAAATCAGAACAACTAAAACTTGGCAAGTAAGTGAGGGTTATGAGTTCATTGAATTACGTCGACACACAAGTGCAACCGAGCGTATCGTTGATTTCAAAGACGGTTCGATTCTTCGTGCTCAAGACCTAAACATTAGTACAATCCAAGCGTTACACATTGCTGAGGAAGCTCGAGGTCTAGCAGCCGATACCTTAGGGGTCAATGATGATGGGCATTTAGATGCTAGAGGTCGAAAGATTGTAAATGTGGCTAACCCAGATTCTGACAGAGATGCCGTTAACTTTAGGTTCCTCAATGAGGCCGAGAAGTCAGTCACTCAAACCCTAGCTGAAGTTAAGCGGTTGAAGCAAGATATTGATGCTAAACATACACAGGTTGGTAAAGATACGAACGAGGTAAGACAAGTGGTTGTTACTGTTAGTCAACATAAAGTCGCTTCGGAATCAGCAAGAGATCGTGCGGAAACTGCTGCATCTCAAGCGGAACAATCAGCTAGCACTGCGAGCACTAAAGCTAACCAAGCGAGCCAATCGGAACAGAACGCTTCAACTAGTGCGTCCCAAGCGAGCCAATCGGCAACTAAAGCAGAACAGGAAGCCAATAAGGCACAGCAGGCTGCCAATAAGGCTATCGGTGGAGCTATTCCAAACAGTATGAAATCAGATAATGATGACAGTTCAAGTTCAGATACTGTTGCAACTAGTTACGCTGTTAAAAAGGTACGAGACTTTGCAGAAAATCAATTTTCATCCCTAGCTAATGCGGATGGCTATAAACATGTTGGTCGTTGTAAATCAGTAGAGATGTTACGCAAAGTCGTTCCTAGTAAACATGGACAGCGTATTTTGGTGGATGCGTACTATGAAGACAGCACAACAGGCGGTGGTGAGTTTGTGGCGGATTTGCAAGATTTAACGACAGCAGATGATGGAGGAAGTTGTTTTGTTGTGTTGAACAATACAGCACGCTGGAAACGGATATTTGATGATCGTGTGGATGTGGTTGATTTTGGCGCAAAATCAGGTGAAGACGCGACAATCGCGTTTGAAAATGCGTTTAAATATGCGGGTGAGCACAAGAAGATAATTACGTCTGAAGCGTCCACTTATTTCATCAATAAGCCATTATTTCTCTCGGGTGTTGGGGGGATTGAATTAAACGGTAAGCTTTATGCAAAAACGGCCCCAGCGAACAAAAGTAAACCCATTATTACTTGGGCAGAAAATGCGACAACACTCACGCAATCGCACAACAATTTTATTAATTTGGTCATGTGGTTAGATCCGACAGAGGATGCTCCCGCGATATGCTTAGCGGGTTTAAAATCGACCAATTTAAAGATTGGAGAAACGGGCTGTGTTCAGATTTACGCAACAACAGAGAAAAATGAGCAACAAGTTGATTTTAAAGGCGTGGAGGTTTCTTCAACGGCTTATAATCGATTTGATATTGATGTGTTATCTACTTTACACATTACAGGCAAAGGGCAGGGTTGGGTAAATGAAAATGTCATTAATGCACAACGCTTTAGAGCATTAAAAGCGGGCTTCCGGGCAGGTATACTCATTGATGGTGAGTATCGCCATAATCATAATTTAATTAGACGAGGTTGTTTGGAGGGAGGGCAAACGATAAATATTGAAAATGGCTCAAGCAACACAATTGAGGATGCGCGTTTTGAGCGTAATCCGAAAAATCCGGATGAGTTATTAACGATTTCGTTTTCGGAAAACGCCTTTTCAAACAGAATCATTGCGAGCTGGGTATCAAGTCCAGAATTCACAAATACCCCCTACGGTGTGCATTACGACATGGTGAAGGTGACGGATAAGGGAGTAGACAATGTTGTGAGTCATATACAAGAAACTTATTCAGATGAAGTGTGTTTATTTGCCTTGTCACAGACGACATCTTTTGTCTCAACGCTCAATAAAGCGACCTTTCCCATGAAATACACAACCGATATTGAAGGGGTGAATGGTATTAAGCAGCTTATTAGTGGTAGTTTTAAACTGTTGCAAAATTACGCTGAAGTCTATAAACAAAGCCAATTCATACACGTAAGAATCGGAACGATGTTTGATTTAAGTTCAGATGCATCACACTTCCGCTTAGGAGTGGAATTGTTTGATGAAAACAAAGCACCGATTACTACAGCGTTAGATAGTCATATAAAATCAGGACAACTCAAAGTCGATGGAAACAAATACAAGTTGGACCGCAATGTGAGTAATGCTAATTTTACGATTATCTCTGAGCAGGTGCGCTATGTAAGGGTGTTAATCACTTCAGGAAATGGTACGGAAAACCAAGTTTTTGATTATTTACGTTTTGTGGTGCGCTATCCGAAGCACTTTATTGAAAAATCGAGAGGATATCATAATATTCAACAGCCGATTAGAAAGCGAAGCTTGTTTTATAGAGGTGTTGATGGTGATATTGATATGGCGGAAGTGGGGGAAGGTGTAGTGTGCTATAAACAAGATTTAAGTGAAATGAAAATTAACTTAGTCCGTGTGGCTTTAGTGATTAACAAGATAGTCGGGAAAGTGTTAATCATTGAGGGTCTTCCTGTTTCAGGGATAAGAGAGCACACACAAGATAGCGAGAAAGGTTGGAGCTTGATTTATCAGCGCAATGACCAAGAGCATAAGCTTGCGGTGGAGAGAGTGGAGTTTTTGCAGAGTGAAAAACAAACCAAAATTCACATACAAGGTACTATACCGTCGGATCTTAGGATGGGGGAGAGTATCGTGTTGATTTTAACAAAGACAAAGAAGCTAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
773617d150cb91c2dbf88bb9dd8a00848c006324354a1cc53fb5399dc81bf40a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6079
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of a Novel T7-Like Bacteriophage from a Pasteurella multocida Capsular Type A Isolate Chen,Y., Sun,E., Song,J., Yang,L. and Wu,B. 2018 29307051 GenBank