Protein

View in Explore
Genbank accession
ARK07383.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MYKDNGKSKTLASVTAGTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVHKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDSQVFDSLKFSYIDPKTNVKETITIPETGGLKTETGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:312 AA
molecular weight: 35156,88520 Da
isoelectric point:5,49078
aromaticity:0,10897
hydropathy:-0,58237

Domains

Domains [InterPro]
DC_0118
STR
5–274
DC_0118
NF040662
Unmapped
21–241
NF040662
ARK07383.1
1 312
Architecture
STR
STR 5-274 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SE40
[NCBI] 		1965375 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARK07383.1 [NCBI]
Genbank nucleotide accession
KY626163.1 [NCBI]
CDS location
range 14795 -> 15733
strand +
CDS
ATGTATAAAGACAACGGCAAGTCAAAAACACTGGCATCCGTTACCGCTGGTACAGACCTGGACTTTAATTTCGAGGGGTCTGTAGTCGATGAGATAACGTACGTTAACTTATACGGGCAAACACGTGACAACACCCCACACTACGGCAACAGAACAACAGTACACTCGATGCGCAAGCAGACCCCACGTGCTGCGGAAGTAAAGCAACCGCAGTTGCGTATGATTGCTACTGAAATGGTACACAAATACCTTGGTAACGGTGTTTTCGAAGATACGATGACCCCCAATACCCAGGCCGTGCAATCTCTTATCCGCCTGGCGCGTGATCCGGATGTGGGGGGTTTAAACCTGACGGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTCGGTGACAAACAGGCGGGGGAATTTTGCTACACGTTTGATGACTATAAAACCACCATGCAGGACATAGTTAGTACTATAGCAGACGCCATATTCTGCACCCCATATCGGCGTGGGGCGGATATCCTTCTCGATTTTGAGCGCCCCCGCATGGGTCCTGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACATTTAACGATTCTCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTAAGACGAACGTCAAAGAGACTATAACCATACCCGAAACCGGGGGCCTTAAAACGGAGACTGGTAATAGCGCTTTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTCGGTCGTGCGTTCTCCAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8dd898ed4c978f12f3e0c41b9de572142209431f57be85917914adc1aac7f0d8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5864
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition, strain of bacteriophage Escherichia coli, used for obtaining thereof patent RU2518303 Dyatlov,I.A., Aleshkin,V.A., Aleshkin,A.V., Afanas'Ev,S.S., Svetoch,E.A., Volozhantsev,N.V., Vasyliev,D.A., Zolotukhin,S.N., Amerkhanova,A.M., Kiseleva,I.A., Verevkin,V.V., Krasilnikova,V.M., Myakinina,V.P., Bannov,V.A. and Rubalskiy,M.O. 2019-04-29 — GenBank