Protein

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Genbank accession
WPJ70029.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTTRISKTRALATIKSLEAKIRKATEQQLLIAVGEGKDKNQVVVGAAIEVDALSTRIKTDFQSLLDMMSQRDHLKAALIKSNAETVVEIGSRSMTVAEAIEAKRSMELKAQLLANMRKQFHAATVKFNTQKAQFDNKYERLQDTMATRDKKTSEDEVKMQLNLLELKNTPFLIDPLELEKLIKQHDEEYQDFATNVDFVLSESNASTFIEVE
Physico‐chemical
properties
protein length:212 AA
molecular weight: 23980,21450 Da
isoelectric point:6,03331
aromaticity:0,04717
hydropathy:-0,42123

Domains

Domains [InterPro]
DC_0027
STR
1–212
DC_0027
Coil
Unmapped
7–27
Coil
WPJ70029.1
1 212
Architecture
STR
STR 1-212
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage RA40
[NCBI] 		3075146 No lineage information
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ70029.1 [NCBI]
Genbank nucleotide accession
OR242313.1 [NCBI]
CDS location
range 1363 -> 2001
strand -
CDS
ATGACTACTCGTATCTCTAAAACTCGTGCTCTGGCAACTATCAAGTCTCTAGAAGCTAAAATCCGTAAAGCTACTGAACAACAGCTTTTGATTGCTGTTGGTGAAGGTAAGGATAAGAACCAAGTTGTAGTTGGCGCTGCAATCGAAGTAGATGCTCTGTCTACTCGTATTAAGACTGATTTCCAGTCTCTGTTGGATATGATGTCCCAGCGTGATCATCTGAAAGCAGCGCTGATCAAGAGCAATGCTGAAACTGTTGTAGAGATCGGTTCCCGATCTATGACTGTTGCGGAAGCAATCGAAGCTAAGCGTTCTATGGAACTCAAAGCTCAGTTGCTGGCTAACATGCGTAAGCAGTTCCATGCTGCTACTGTTAAGTTTAACACTCAGAAGGCTCAGTTTGATAACAAGTATGAGCGTTTGCAGGATACCATGGCTACCCGCGACAAGAAGACTTCTGAGGATGAAGTTAAGATGCAGCTTAACCTGCTGGAACTCAAGAACACTCCGTTCCTGATCGATCCGCTGGAGCTGGAAAAGCTGATCAAGCAACACGACGAAGAATACCAGGATTTTGCAACCAACGTTGACTTTGTTCTGTCTGAGTCCAACGCCTCTACTTTTATCGAAGTAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c1deba87f13a8c84ba1aa01e1a91ad55b685b809c34d7fbc3c48f718a8faebb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9211
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages to control Salmonella in UK pigs Clokie,M., Atterbury,R., Gigante,A., Thanki,A. and Hooton,S. 2021-11-10 — GenBank