Protein

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Genbank accession
UVD31727.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTDDVTGLLPGDVITGPTSGAVATVGAVFGKEIWCDVTNGVTFMPGENIGANVIEYLSTEAIDQRSYSPTATRTTILLMSPLAANTLEVGNALLGLSSAATVEVNIIKVTNADMWVYVSTLAGAVQVGETMVKGDGTEYKVNGEYEVEPMLASPDTPAGVFFYLSELRRAKIGVVPGINSVRGVWDLEGVVYSFRDADANSTKMYRSTVTGWQEVDLGFTMGWDTRPSTTTDDELGPGDTIRGVTSGATATVGWVGYIAQDHSSGYLTFTDVTGTFQAGEVIHNDTYNVDIGEVTAAATPNVLPANGLYRFTNHNFFGGMNTFAMYGVNGVSNGFVYDETHGFSFIPTQADTDTPFDVVEYKDHLFFAFPKGSLQHSVLGSPMDWSGGLGALAVGVGSEISSLIPAPKSLIICTDKDIQSLEGSSIDDWQKEVITQHTGISKFTGVYQSQSLVLAQAGIISIDRTDQFGNFSDGTISDVIRDTIVPNYSRCTCAMARKSRGQYRLHFEGDVNIALSTNQGNVIGFSMFDYGGLTVRAAVNPYGRIFFISDTGYVYQDSVGASNDGGERSSVFRTSFANQGDPDTRKRYRRMDMSIRAQSYLNARVVFSYNKGASTPQASVESGLLVSGGGRWDLSLWGQVYWDATENPTISSDIDGLGFDVSTMLYIRSRIHPQFTAEDLSFEWSPRRKVR
Physico‐chemical
properties
protein length:691 AA
molecular weight: 74729,39250 Da
isoelectric point:4,65980
aromaticity:0,10420
hydropathy:-0,12359

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVD31727.1
1 691
Domain Start End Length (AA) Confidence
N-terminal 1 249 249 0,7743
Central domain 250 448 200 0,1513
C-terminal 449 691 242 0,4002
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-249
Central
250-448
C-terminal
449-691

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Pondi
[NCBI] 		2972476 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVD31727.1 [NCBI]
Genbank nucleotide accession
OP136151 [NCBI]
CDS location
range 58520 -> 60595
strand -
CDS
ATGACGGACGATGTTACAGGTCTGCTACCGGGTGACGTTATCACAGGACCAACGTCCGGCGCGGTAGCAACTGTCGGCGCGGTTTTCGGTAAAGAAATCTGGTGTGATGTCACTAATGGTGTCACATTCATGCCGGGTGAGAATATCGGCGCTAACGTTATCGAGTACCTCTCGACGGAAGCTATTGACCAACGCAGCTACAGTCCGACAGCTACACGCACTACGATTCTGTTGATGTCACCGCTGGCGGCTAACACGCTGGAAGTCGGCAATGCGTTACTGGGCTTATCCTCAGCCGCTACAGTGGAAGTGAACATCATCAAAGTTACCAACGCTGACATGTGGGTGTACGTGTCCACGCTGGCTGGTGCGGTGCAGGTTGGCGAGACTATGGTGAAGGGTGACGGTACCGAGTATAAGGTCAACGGTGAGTATGAAGTGGAACCGATGCTGGCCTCCCCGGATACTCCCGCAGGTGTCTTCTTCTACCTGAGTGAATTACGTCGCGCTAAGATTGGCGTGGTGCCGGGTATCAACAGTGTGCGCGGTGTATGGGATCTGGAAGGTGTCGTGTACTCGTTCCGTGACGCTGACGCCAACAGCACTAAAATGTATCGCAGTACGGTGACAGGCTGGCAGGAAGTCGACCTGGGCTTTACGATGGGATGGGATACGCGCCCGTCTACCACCACTGACGACGAACTCGGTCCGGGCGATACAATCCGTGGTGTGACGTCCGGCGCTACGGCAACCGTCGGCTGGGTAGGTTACATCGCTCAGGACCACTCGTCCGGTTACCTGACGTTCACTGACGTGACCGGAACGTTCCAGGCTGGCGAAGTGATTCACAACGATACGTATAACGTTGACATCGGTGAAGTGACGGCGGCGGCCACGCCTAACGTTCTCCCGGCTAACGGTCTGTACCGCTTCACCAACCACAACTTTTTCGGCGGTATGAACACGTTCGCAATGTACGGCGTGAACGGTGTGAGCAACGGCTTCGTTTACGACGAGACGCATGGCTTCTCCTTTATCCCGACGCAGGCTGACACGGATACCCCGTTCGATGTAGTGGAATACAAAGACCATCTGTTCTTCGCGTTCCCGAAAGGTAGCCTGCAACACAGCGTGCTGGGTAGCCCGATGGACTGGAGCGGTGGCCTCGGCGCACTGGCGGTCGGCGTAGGTTCGGAAATCTCTTCACTGATTCCGGCACCAAAATCGCTTATTATTTGTACAGATAAAGACATCCAAAGTCTTGAGGGGAGCAGCATTGATGACTGGCAAAAAGAGGTTATTACTCAGCATACTGGTATCTCTAAATTTACTGGGGTGTACCAGTCTCAATCACTCGTACTCGCCCAGGCAGGCATCATTAGTATCGACCGGACTGACCAATTTGGTAACTTTAGCGACGGTACTATCAGCGACGTCATCAGAGACACCATCGTACCTAACTATTCTCGCTGCACTTGCGCAATGGCAAGGAAGAGTCGAGGGCAGTACCGACTCCACTTTGAGGGAGACGTCAACATCGCCCTTTCCACTAATCAGGGGAATGTGATCGGCTTCTCGATGTTTGACTACGGCGGTCTGACGGTGCGTGCTGCGGTCAACCCGTACGGTCGTATCTTCTTCATCTCGGATACCGGATACGTCTATCAGGATTCCGTAGGGGCCAGTAACGATGGCGGTGAACGGTCATCAGTATTCCGTACTTCCTTCGCCAACCAGGGTGACCCGGATACCCGTAAGCGGTACCGCCGTATGGACATGAGTATCCGCGCACAATCTTACCTTAACGCGCGTGTCGTTTTCTCGTACAATAAAGGCGCATCCACTCCGCAGGCATCGGTCGAATCTGGCCTGTTAGTGTCCGGCGGCGGTCGCTGGGATTTGTCGCTGTGGGGGCAGGTCTACTGGGATGCCACGGAAAACCCGACAATCTCATCTGACATTGACGGCTTAGGTTTTGACGTCAGCACGATGCTGTACATCCGGTCACGAATCCATCCGCAGTTTACCGCAGAGGATTTATCATTCGAATGGTCACCACGTAGAAAGGTACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f9bc0e7590dfe21ab2c0a18aad6cbba2ae148fd685d101d7289fb967e91e656
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7703
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A flexible and efficient microfluidics platform for the isolation of novel bacteriophages Sidi Mabrouk,A., Ongenae,V., Claessen,D., Brenzinger,S. and Briegel,A. 2023-01-31 — GenBank