Protein

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UniProt accession
A0A8S5Q5X3 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MFDARKGQITITRGDTGLLAIVPTGYVPTSQDRMFFMVAEMPDGRIVINKTVTPDDDGVCKLMFSGTDTENLSKRHREYTYAIRFALDVTESNGKITGYREMITPEPPGCFVVLEANGCPACTCETQNVGSMEVKLESFRGPKGDRGETGPIGPQGPKGEKGDKGDRGAKGEPGKDAVIDATLTQEGEAADAAATGKRLAEIEKAVAEKADKARQNILIGSETGNPVSVSDAFSAPLCGLTVYGKSTQDGTPSPDNPAPIVSAGDGGTITVTIGDGADERQTITLPTPNGLPGIPVASGGNYTDPGGQRWVCDEVDLERGVKVQRVDKGAFDATKALAEQSVILVTPIETPLTPAELTAYKALTTYAPNTVVQASDGAGLKLDYQRDVNIVIKNLEDAIASMTTT
Physico‐chemical
properties
protein length:405 AA
molecular weight: 42588,34730 Da
isoelectric point:4,70163
aromaticity:0,04691
hydropathy:-0,34395

Domains

Domains [InterPro]
DC_1397
STR
12–402
DC_1397
IPR008160
STR
141–174
IPR008160
A0A8S5Q5X3
1 405
Architecture
STR
STR 12-402 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ctJaJ36
[NCBI] 		2825243 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE14742.1 [NCBI]
Genbank nucleotide accession
BK015592 [NCBI]
CDS location
range 20090 -> 21307
strand +
CDS
ATGTTTGATGCGAGGAAAGGCCAAATTACCATTACGCGAGGCGATACGGGCTTGTTGGCGATTGTGCCAACAGGCTATGTACCGACGAGCCAAGACCGGATGTTTTTCATGGTGGCGGAAATGCCGGACGGCAGGATCGTCATCAACAAAACGGTCACGCCGGATGACGACGGCGTTTGTAAGCTCATGTTTTCCGGAACGGATACGGAGAACCTCTCCAAAAGGCACAGAGAATATACCTATGCGATTCGGTTTGCGCTGGACGTGACGGAAAGCAACGGAAAGATTACGGGTTATCGGGAAATGATCACGCCTGAACCGCCCGGATGTTTTGTTGTGCTTGAAGCAAACGGATGCCCTGCGTGCACCTGTGAGACCCAAAATGTAGGCAGCATGGAGGTCAAGCTTGAATCCTTCCGCGGCCCGAAGGGAGACAGGGGTGAAACAGGCCCGATTGGCCCGCAGGGACCCAAGGGCGAAAAAGGAGACAAGGGGGACAGGGGCGCAAAAGGCGAACCGGGCAAGGATGCCGTCATCGACGCGACGCTGACCCAGGAGGGGGAGGCGGCGGACGCGGCCGCAACGGGTAAGCGGCTGGCAGAAATCGAGAAGGCTGTTGCTGAGAAGGCCGACAAAGCGCGCCAGAATATCCTGATCGGCAGCGAAACTGGCAATCCTGTATCTGTCTCTGACGCTTTTTCCGCGCCGCTGTGCGGGCTGACTGTCTACGGCAAGAGTACGCAGGATGGCACACCAAGCCCGGATAACCCGGCGCCGATTGTGAGTGCGGGGGACGGCGGGACAATCACGGTGACGATCGGCGATGGGGCGGATGAGCGGCAGACGATCACCCTGCCCACACCCAACGGCTTACCCGGCATCCCTGTCGCCTCTGGCGGCAACTACACTGACCCTGGCGGGCAACGGTGGGTGTGCGATGAGGTGGACTTGGAAAGAGGGGTGAAGGTGCAGAGGGTTGATAAAGGTGCTTTCGATGCCACCAAAGCGCTGGCTGAGCAAAGCGTGATTCTCGTCACCCCCATCGAAACCCCGCTCACCCCCGCCGAACTTACCGCCTACAAAGCGCTGACTACCTACGCGCCCAACACCGTGGTGCAAGCAAGCGACGGCGCGGGGTTGAAACTGGACTATCAAAGAGACGTGAACATCGTAATCAAAAATCTTGAGGACGCGATTGCGTCTATGACTACAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7ef202a9d43129172759ba19dcc4f5dbb1f4416ca2d2c73f06b5495d0064440c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8175
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50