Protein

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Genbank accession
WDS62245.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAALKQGDTSDSVRKLQEALVRKGYKLVADGQFGPATYNAVVAFQKATNLVADGIAGNATLTALGLVQSSVLDPIPMPKANRSRSAAMPTLEAIGKITGVSPTLLATFASIESNFDYTVKASTSSATGWFQFLDKTWDDILTQTFGKYALKDNARRSLRTDPRANGLMGAEFLKDNARILRQGLGREPTDTELYAAHFFGAGTAKKFLLADQSALGAELFPRQAAANVGIFYARDKKTPLTIGAIIKLFESKVAAHRG
Physico‐chemical
properties
protein length:258 AA
molecular weight: 27650,27930 Da
isoelectric point:9,69355
aromaticity:0,08527
hydropathy:-0,10775

Domains

Domains [InterPro]
IPR036366
ATT
1–65
IPR036366 G3DSA:1.10.530.10
IPR036365
RBD
3–66
IPR036365 IPR023346
IPR002477
CBM
10–64
IPR002477 IPR008258
WDS62245.1
1 258
Architecture
ATT
RBD
STR
RBD
ATT 1-66 | RBD 76-88 | STR 89-206 | RBD 207-258
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage D6
[NCBI] 		3025445 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. tomato str. DC3000
[NCBI] 		223283 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae group genomosp. 3

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS62245.1 [NCBI]
Genbank nucleotide accession
OQ363659.1 [NCBI]
CDS location
range 155791 -> 156567
strand -
CDS
ATGGCTGCTTTAAAACAAGGTGACACTAGCGACTCCGTTCGCAAATTGCAGGAAGCATTAGTGCGTAAAGGATACAAACTCGTAGCCGATGGTCAGTTTGGTCCAGCAACGTATAACGCAGTGGTTGCTTTCCAGAAAGCCACTAACCTGGTAGCGGATGGTATTGCTGGTAACGCAACGCTGACTGCGTTGGGACTAGTGCAAAGTTCAGTCCTAGATCCTATCCCAATGCCTAAGGCTAATCGGTCACGCTCCGCTGCCATGCCGACCTTAGAAGCAATTGGAAAGATTACGGGTGTAAGTCCAACTCTGTTGGCTACCTTCGCATCGATCGAATCTAACTTCGATTACACGGTGAAAGCTTCGACCTCTAGTGCTACAGGTTGGTTCCAATTCTTAGATAAGACTTGGGATGACATCCTGACGCAAACGTTCGGCAAGTACGCACTGAAGGATAACGCTCGTCGTAGTTTGCGAACTGACCCACGAGCTAATGGCTTGATGGGTGCTGAGTTCCTGAAAGACAACGCGCGTATTCTGCGTCAAGGCCTGGGTCGTGAACCAACGGATACTGAGTTGTATGCTGCGCACTTCTTTGGTGCTGGTACGGCTAAGAAATTCTTACTAGCTGATCAATCAGCACTTGGTGCAGAGTTGTTCCCACGCCAAGCAGCAGCTAACGTCGGTATCTTCTACGCCCGTGATAAGAAGACTCCGTTGACGATCGGTGCGATCATCAAACTGTTCGAATCCAAAGTTGCAGCCCATCGGGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6b68dc42fde730259da7dabfbd61f10892a2a2d4b0b322432303327df221da65
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9399
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50