Protein

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Genbank accession
QBQ72723.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAKKPDITTIASGYASNTSLNANFESLRDGFDNVLSLDGSTPNAMQSDLDMNGNDIINASSITIDGVDVFTLINKITVSTSDPSGGQDGDIWFKVSS
Physico‐chemical
properties
protein length:97 AA
molecular weight: 10207,05690 Da
isoelectric point:4,05003
aromaticity:0,06186
hydropathy:-0,19691

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-5
[NCBI] 		2559284 Uroviricota > Caudoviricetes > Zobellviridae > Veravirus >
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72723.1 [NCBI]
Genbank nucleotide accession
MK613347.1 [NCBI]
CDS location
range 37950 -> 38243
strand -
CDS
ATGGCTAAGAAACCTGACATCACTACTATTGCATCTGGGTATGCCTCGAATACTTCCTTGAATGCTAACTTCGAGTCTCTTCGTGACGGCTTCGATAATGTTTTGTCATTGGATGGTAGTACCCCTAACGCCATGCAGTCTGACTTAGACATGAATGGCAATGACATTATTAATGCCTCAAGTATTACTATTGATGGTGTTGATGTCTTTACGCTTATAAACAAGATAACAGTAAGTACTTCTGATCCCTCAGGTGGACAAGATGGAGACATCTGGTTCAAGGTCAGTTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
94400200b8f02722679d04d6573bf8600f2cd9cca0770b0e74c0485d44d6056e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8852
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank