Protein

View in Explore
Genbank accession
WXH65943.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTIMRLRSVGNTGVTTDIPAYDLKPSDWSWANNVRFQANRVQKIGGAKASLTRAMPKQHPLGVVQRPLTEALLYGTYNPVTKKGELWEASGNTHTKVSKKVSGAFVDYNATPQYGWDYTTLSNTIIFNTRLSDPQGIKPGQANFSDLPNWGYPNGKVVDGEYVPDGPYRGWKANRIRAFKNYLLCMGIWEDGIEYPQRVRWSSSAMVGELPANWFQNLDTLDGGFNDLTDSLSHIIDGRPLRDSFVVYTNRDTFIMDYVGGTMVFNFRKIFSDSGMLAPNCCVEFEGKHFVISEDDIFVHNGSTRQSVATGRVKDYLMGQISQNNYDATRVYAYPAKKEIWIAYVSNGNTGESVGPNSEKVYACDKAAVWSWQYDTWSFTDLPYVYDIGIGISPETDTRFWNDEFFVPTPEHPKEYGDYPWEEPEITDDTWEREAQAFTRHVMFGASSHMCFYQLDAGYTWDRWNSTTETTNPVPVVCELQRAALDFDEQEPDISYHKWWRAVYPQMGGEGTVRFYIGGSNSPNGEPTWDSWQDFDIENDSKVDCFSNYRYPAIRLLDASEGTWSMVGYDVEYFREGNR
Physico‐chemical
properties
protein length:579 AA
molecular weight: 66098,57080 Da
isoelectric point:4,86959
aromaticity:0,14335
hydropathy:-0,57789

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WXH65943.1
1 579
Domain Start End Length (AA) Confidence
N-terminal 1 382 382 0,4570
Central domain 383 568 187 0,3187
C-terminal 569 579 10 0,9961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-382
Central
383-568
C-terminal
569-579

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SeKF_80
[NCBI] 		3113360 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WXH65943.1 [NCBI]
Genbank nucleotide accession
OR863363 [NCBI]
CDS location
range 17979 -> 19718
strand +
CDS
ATGACAATTATGAGATTACGTAGTGTCGGGAATACCGGTGTTACAACTGATATTCCTGCATACGACTTAAAGCCCTCTGACTGGTCTTGGGCTAACAATGTTAGATTCCAAGCCAATAGGGTTCAGAAGATTGGTGGGGCTAAGGCCTCACTTACTCGTGCAATGCCAAAACAGCATCCATTGGGTGTTGTTCAGCGTCCACTAACAGAGGCACTTTTATACGGGACTTATAACCCTGTTACAAAGAAAGGTGAACTCTGGGAAGCTTCCGGTAACACACACACTAAAGTTTCTAAGAAAGTAAGTGGTGCTTTTGTAGACTATAATGCTACACCTCAATATGGTTGGGATTATACTACACTTTCAAACACCATCATCTTTAACACGAGGTTGTCAGACCCACAAGGTATTAAACCCGGTCAAGCAAATTTCTCAGATTTGCCAAATTGGGGTTATCCAAATGGGAAGGTTGTAGATGGTGAGTATGTACCAGATGGTCCTTACAGGGGTTGGAAGGCAAACAGGATTAGGGCTTTCAAAAACTATCTGCTATGTATGGGTATTTGGGAAGATGGTATTGAATATCCGCAACGTGTTCGTTGGTCTAGTTCGGCAATGGTTGGTGAACTTCCAGCAAACTGGTTCCAAAACTTAGATACATTGGATGGCGGTTTTAACGACCTGACTGACTCACTCTCTCACATCATTGACGGAAGACCACTTCGTGACTCATTCGTAGTTTATACCAACCGAGATACGTTCATTATGGACTATGTTGGTGGTACTATGGTGTTTAACTTCCGTAAAATCTTCTCAGATTCTGGTATGCTGGCTCCAAACTGTTGTGTTGAGTTCGAAGGTAAACATTTTGTTATTTCTGAAGATGATATCTTTGTTCACAACGGTTCAACAAGACAGTCGGTAGCAACAGGTCGAGTTAAAGACTATTTGATGGGTCAAATCTCTCAGAATAACTACGATGCAACTCGTGTTTATGCATACCCAGCTAAGAAAGAGATTTGGATTGCCTACGTATCAAATGGTAACACAGGTGAATCTGTTGGTCCAAACTCAGAAAAGGTTTATGCTTGTGATAAAGCTGCTGTTTGGTCTTGGCAGTACGATACTTGGTCTTTTACAGACCTTCCATATGTCTATGACATTGGTATCGGCATCTCCCCTGAGACTGACACCCGTTTCTGGAATGACGAATTCTTTGTACCTACTCCAGAACACCCAAAAGAATACGGTGATTATCCGTGGGAAGAGCCTGAAATTACAGATGACACTTGGGAACGAGAGGCCCAGGCATTTACAAGACATGTAATGTTTGGTGCATCATCTCACATGTGCTTCTACCAACTGGATGCTGGTTATACATGGGATAGGTGGAACTCTACCACTGAAACCACAAACCCTGTTCCCGTTGTTTGTGAGTTGCAAAGGGCTGCACTGGATTTCGATGAGCAAGAACCTGATATTTCCTATCACAAATGGTGGAGGGCAGTTTATCCACAAATGGGAGGTGAGGGGACTGTTAGGTTCTACATCGGTGGTTCTAATAGTCCAAACGGTGAGCCAACTTGGGATTCTTGGCAAGATTTTGATATTGAGAATGATTCGAAGGTTGACTGTTTCAGTAACTACAGATATCCGGCAATTAGATTGTTAGATGCTTCTGAGGGTACTTGGTCAATGGTTGGCTATGACGTTGAATACTTCAGGGAAGGTAATAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
57610b5b98317233ae54ee32c0c5483d9242bd976d73ea6951652afb0938d527
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8395
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50