Protein

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Genbank accession
WYA84512.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MSQIKHNIDNAFQLIDGHVQFMERSTGLTIDPTVQHYLINPEHVLANNRHFINWTGQEGQPNGDATTEGQSVLVLGCAYAYLGTGDVKYLDLAKTYWQAYIDHFFGGQSIPNPPAKYRPNWIINGKEPRLAHYPLTDDGYPTHGGFKGSVMTWTNGRTVIPKGAPHWGEYLDKAWFAFNGNLGWNSVNATVYGTKADGSTDWDVKGSQWDVDWIIDRLGRKVDWDGNILSTGHSLSEYGTVQLKNKTVTGNYKFNYATCNPVDKGGYLIGRNEMWHNRPVNVPIDISFADNASDAETWWCDACYLMYKITGEEKYRLAWKSSLMVCIDYSDIDRFDKFFRKSTLASIPFTDGISYDYYYPSGSTADFGRDAQGYITIRQKVAAQTTMEQQAIWFRVDNNSKLRVEFAGVDDAGVPVIFRPELSLSKTKTNDDLVDYRCGIPTATTSIQSMDIPLSSFIRSTPPGGGQYIVADPRNVIDWGDNTVVNFQYTTNILPANISDQICTAVMDTDGGISIGFWLLDEEVAPLKSLSYRSYNDDFNITLTDKDGWRWWAMLEKTGGTWVTKTITAASFQLSSWQPNHPETDPKPTTIDISALDQINIGLDTDPVNGVNAQFDWYCVNEVPTRYSSANGDDYTMYFRIALQAQSPYSAKLGDCVIIDYKLNSLYYTPGIIPFSNISDPNTALFDGWRGLPYPGYQYPVLYCFAGENIEYTRLTESINFLYDSQMWFYETFDPVMPGPMAQAFVWDRWDALKYGEKNKFTMKHWNEKAWDGYEARAFYCGARCLHELQARGEPIPAKLMTVTKNWVNYLKWFQDNNEGRTPTIFMPDGTVSAPTWDFTSHMSALFLAGCCYIGLANLENQIPNISIVADRCFDLLQENYVVAGPNHVMNGSWSSNPDAANDNAPAFGFHSGEILRGFGLYALYRRSNAQSSLPNIGIDLRP
Physico‐chemical
properties
protein length:943 AA
molecular weight: 106419,84060 Da
isoelectric point:4,96622
aromaticity:0,13574
hydropathy:-0,38780

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYA84512.1
1 943
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0857
Central domain 11 285 276 0,8919
C-terminal 286 943 657 0,1197
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-285
C-terminal
286-943

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PsgM04F
[NCBI] 		3088886 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. garcae
[NCBI] 		251653 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas coronafaciens

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYA84512.1 [NCBI]
Genbank nucleotide accession
OR584014 [NCBI]
CDS location
range 140908 -> 143739
strand +
CDS
ATGTCTCAAATTAAGCACAATATTGATAATGCTTTCCAACTGATTGATGGTCATGTCCAGTTCATGGAAAGAAGCACAGGTCTGACAATCGATCCAACGGTACAGCATTACCTTATCAACCCAGAGCATGTTCTTGCAAACAACCGACACTTCATCAACTGGACTGGACAGGAAGGACAGCCCAACGGAGATGCGACCACAGAAGGTCAATCTGTTTTAGTTCTGGGGTGTGCTTATGCTTATTTGGGGACTGGTGATGTTAAGTATCTTGACCTGGCTAAAACTTACTGGCAAGCTTACATTGACCACTTTTTTGGTGGTCAGTCAATCCCTAATCCTCCGGCAAAATATCGTCCCAACTGGATCATCAATGGAAAGGAGCCTCGTTTGGCTCACTACCCTCTGACAGACGATGGGTATCCAACTCACGGCGGCTTTAAAGGAAGCGTGATGACTTGGACCAACGGACGTACAGTGATTCCTAAAGGCGCTCCGCATTGGGGAGAATACCTTGATAAAGCTTGGTTTGCTTTCAATGGTAATCTGGGATGGAATTCTGTAAACGCCACAGTGTATGGCACCAAGGCAGACGGATCAACAGATTGGGATGTTAAGGGTAGTCAGTGGGATGTGGATTGGATTATCGATCGTCTGGGACGTAAAGTAGACTGGGACGGAAACATTCTTTCTACGGGACACTCTCTTTCCGAGTACGGTACGGTTCAACTGAAAAACAAGACAGTCACTGGCAACTACAAGTTCAACTATGCAACATGTAATCCTGTAGACAAAGGTGGTTATCTGATCGGACGTAACGAAATGTGGCATAACCGCCCCGTAAACGTTCCGATTGATATCTCGTTTGCAGATAATGCTTCCGATGCTGAAACTTGGTGGTGCGATGCTTGTTACTTGATGTACAAGATCACCGGAGAAGAAAAATACCGTTTAGCATGGAAATCTTCTTTGATGGTTTGTATCGACTACTCTGATATCGACCGTTTCGATAAGTTCTTCCGTAAATCTACACTGGCAAGCATTCCGTTTACGGATGGCATCAGTTATGATTATTACTATCCATCAGGATCTACGGCTGACTTCGGACGTGACGCTCAAGGCTATATCACGATTCGTCAGAAAGTGGCAGCACAAACAACAATGGAACAACAGGCTATCTGGTTCCGTGTGGATAATAATTCCAAATTACGTGTAGAGTTTGCAGGTGTAGATGATGCGGGTGTACCTGTTATCTTCCGTCCTGAATTATCTTTGAGTAAGACAAAAACGAATGACGATTTGGTAGATTATCGTTGCGGTATCCCGACAGCGACAACCTCTATCCAATCAATGGATATCCCGTTGTCCAGTTTTATTCGTTCAACACCTCCAGGCGGTGGACAGTATATTGTTGCTGATCCGCGAAATGTTATTGACTGGGGTGACAATACTGTGGTAAACTTCCAGTATACAACGAATATTTTACCTGCCAACATTAGTGACCAGATTTGCACTGCGGTTATGGATACTGACGGTGGAATCTCTATTGGCTTCTGGTTACTGGATGAAGAAGTAGCTCCACTCAAATCCTTATCTTACCGTAGTTACAACGATGACTTCAATATCACGTTGACGGATAAAGATGGATGGAGATGGTGGGCCATGTTGGAAAAGACTGGCGGTACTTGGGTAACTAAGACAATAACTGCGGCAAGTTTCCAGTTAAGCTCTTGGCAACCGAATCACCCAGAAACAGATCCTAAACCAACAACTATCGACATTAGTGCTCTCGATCAAATCAATATTGGTCTGGATACTGATCCTGTAAATGGTGTGAACGCACAGTTTGATTGGTACTGTGTCAACGAAGTGCCTACACGTTATTCTTCTGCAAATGGTGACGACTATACGATGTATTTCCGCATTGCTTTGCAAGCACAGAGTCCGTATAGTGCAAAACTTGGCGACTGTGTAATCATCGACTACAAACTGAATAGTCTCTACTATACACCAGGAATAATTCCATTCTCCAACATTAGCGATCCTAACACGGCGTTGTTTGATGGTTGGCGTGGACTACCGTACCCTGGATATCAGTACCCAGTATTGTATTGTTTTGCTGGTGAGAATATTGAGTATACACGATTAACAGAAAGTATCAACTTCCTTTACGACTCTCAAATGTGGTTCTATGAAACATTTGATCCGGTTATGCCTGGACCAATGGCTCAAGCCTTTGTATGGGATCGTTGGGATGCATTGAAGTACGGCGAAAAGAACAAGTTCACAATGAAACATTGGAATGAAAAAGCTTGGGACGGATATGAAGCTCGCGCATTCTATTGTGGTGCTCGTTGTTTGCATGAACTGCAAGCCCGTGGCGAACCTATTCCAGCCAAACTTATGACGGTGACTAAGAACTGGGTGAACTATCTCAAGTGGTTCCAAGACAACAACGAAGGGCGTACTCCTACAATCTTCATGCCTGATGGCACAGTCTCGGCTCCTACGTGGGACTTCACATCACATATGTCGGCTTTGTTCCTTGCGGGTTGCTGTTATATCGGGTTGGCTAATCTGGAAAACCAGATCCCTAACATTTCCATTGTAGCGGATCGTTGTTTTGACCTCCTGCAAGAGAACTATGTTGTTGCTGGCCCTAACCATGTGATGAATGGCTCTTGGAGTTCTAACCCTGATGCTGCAAATGATAACGCTCCGGCGTTTGGTTTCCACTCTGGAGAAATCCTCCGTGGCTTTGGTCTGTACGCTTTGTATCGTCGAAGCAATGCACAATCCAGCTTACCAAACATCGGTATTGATTTGAGGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
593715a305bdc698aa2d0caf2a07c75a32509f5720607f604a08f8111b4ae8c1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3225
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50