Protein

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Genbank accession
CAH1078535.1 [GenBank]
Protein name
inner membrane transport protein YdhP
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MASPQSPSSSPRHYSLFLAIFSLAVGGFCIGTTEFVAMGLIQEIAHNLKITVPEAGHFISAYALGVVIGAPIIAILGAKVPRKTLLLCLMLFYGIANACTALAHTPETVLVSRFIAGLPHGAYFGVGALVAAELAGPSRRASAVAQMMMGLTVATVIGVPLATWLGQHFGWRAGFEFSATIAFFTLIAVACFVPNIPVQATASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSPILTEYTKVNIQIVPIALALWGIGMVIGGLAAGWLADKNLNKTIVGVLISSAIAFVVASFLMSNIYSAIGSLFLIGLTVMGLGGALQTRLMDVAGDAQTLAASLNHSAFNLANALGAFLGGWVLSHQMGWIAPIWVGFVLSLGGLIILLIAFAVEKATQKA
Physico‐chemical
properties
protein length:399 AA
molecular weight: 41540,84800 Da
isoelectric point:9,06253
aromaticity:0,09774
hydropathy:0,96692

Domains

Domains [InterPro]
IPR036259
STR
10–390
IPR036259
IPR036259
STR
15–209
IPR036259 IPR036259
IPR050189
Unmapped
18–397
IPR050189
IPR020846
STR
19–397
IPR020846
cd17324
STR
20–377
cd17324
IPR011701
STR
23–335
IPR011701
CAH1078535.1
1 399
Architecture
STR
STR 10-399
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAH1078535.1
1 399
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,1890
Central domain 186 384 200 0,1601
C-terminal 385 399 14 0,9830
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-384
C-terminal
385-399

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage MD-2021a
[NCBI] 		2899278 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAH1078535.1 [NCBI]
Genbank nucleotide accession
CAKLQH020000004 [NCBI]
CDS location
range 230173 -> 231372
strand -
CDS
ATGGCGTCACCCCAATCCCCTTCTTCTTCCCCTCGACATTACTCACTCTTCTTGGCAATTTTTTCTCTTGCAGTAGGCGGTTTCTGTATTGGCACTACAGAATTTGTCGCAATGGGTCTTATTCAGGAAATTGCACACAATTTAAAGATTACAGTACCTGAAGCTGGGCATTTTATTAGTGCTTATGCATTAGGTGTTGTTATTGGTGCCCCTATTATTGCCATTTTGGGTGCCAAAGTACCTAGAAAGACCCTATTGCTTTGCCTCATGCTGTTTTATGGTATTGCCAATGCATGCACAGCTTTAGCACATACCCCAGAAACCGTTTTAGTCTCCCGTTTTATTGCAGGTTTACCTCATGGCGCATATTTTGGTGTCGGCGCTTTAGTCGCGGCTGAACTAGCAGGCCCTTCACGAAGAGCTTCAGCAGTTGCGCAAATGATGATGGGGCTGACCGTTGCTACCGTTATTGGCGTACCCTTAGCAACATGGTTAGGTCAACATTTTGGCTGGAGAGCAGGTTTTGAATTTTCAGCAACGATCGCATTCTTTACTTTAATTGCTGTAGCTTGCTTTGTACCGAATATTCCAGTTCAAGCTACTGCCAGCATAAAAACAGAATTAGCTGGGCTTAAAAATATAAATATGTGGTTAACCCTTGCAGTCGGCGCAATTGGCTTTGGGGGCATGTTCTCGGTATATAGCTATGTCTCACCAATTCTCACTGAATACACTAAAGTTAATATCCAGATTGTTCCTATTGCATTAGCGCTGTGGGGCATCGGGATGGTGATTGGTGGTTTAGCTGCGGGTTGGCTTGCAGATAAAAACCTCAATAAAACTATTGTGGGCGTACTCATTAGCTCAGCGATCGCATTTGTAGTCGCAAGCTTTCTAATGAGTAATATCTATAGCGCAATTGGCTCTTTATTCTTAATTGGCCTAACCGTTATGGGTTTAGGTGGGGCTTTACAGACACGCCTCATGGATGTTGCAGGTGATGCACAAACGCTAGCAGCCTCACTTAACCACTCCGCCTTTAATCTTGCTAATGCATTAGGCGCTTTTTTAGGTGGTTGGGTACTGAGCCATCAGATGGGTTGGATTGCACCAATCTGGGTAGGTTTTGTACTGAGCCTTGGTGGCCTTATTATCTTACTCATTGCATTTGCTGTAGAAAAAGCAACTCAAAAAGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e36432994d64af6d89b29a1fc9c855eee786ccae494c370224215c4c8a986fc6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9519
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50