Protein

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Genbank accession
XAO15127.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRVLFTKDDQGNIIDLGFAKGGSIDGNVIHTGNYNQTGDYTLNGTFTQTGNFNLTGIARVTRDIIAAGQIMTEGGELVTKSSGTAHVRFNDSADRERGIIYAPANDGLTTQVLNIRVQDYAAGSESTYAFSGSGLFTSPEVSAWKSMSTPQILTNRVITNNKSTSDYDIYSMADNVPLAESTTAINHLRVMRNAVGAGVFHEVKDNDGITWYTGDGLDTYLWSFTWSGGLKAGHSISVGTPGGNKGYSELGTASISLGDNDTGLKWHQDGYYFSVNNGTKTFLFSPSETTSLRKFVAGYSTNGTDLTTPPTENYALATVVTYHDNNAVGDGQTLLGYYQGGNYHHYFRGKGTTNINTHGGLLVTPGDVDVVGGSVNIDGRNNASTLMFRGNTTGSSSVDNMTISVWGNTFTNPSVGNRKNVMEISDATSWMSYIQRLTTGEVEMNVNGSFESSGVTAGDRGVHTTGEISSGAVNALRIWNADYGAIFRRSEGSLHIIPTAYGEGKHGDIGPLRPFSMALDTGKVTIPDLQSSYNTFAANGYIKFTGHGAGAGGYDIQYAQAAPIFQEIDDAVSKYYPIVKQKFLNGKCVWSLGTEINSGTFVLHHIKEDGSQGHTSRFNQDGTVNFPDNVQVGGGEATIARNGNIFSDIWKSFTSAGDTTNIRDAIATRVSKEGDTMTGRLTLNTNSDAIVINSAATESGYVKGQKAGVNNWYVGNGGAHNALSFYSFQTNSGVNIHNSGEISLAPQGSDTFYFNRDRLYIKAAQWSAHQSGAWGDQWGLEAPVFVDFGSVSNDCYYPIIKGRSGITNEGYFSGVDFGMRRAPNIWAQGIIRVGNQENGSGPQAIYEFHHNGVMYVPNMVKTGARLSAGGGDPVWTGPCLVIGDNDTGLVHGGDGRINMVANGIHIANWGAGYQSHPGLWDTTGAFWTETGRAIVSHGHLVQQSDAYSTYVRDVYVRSDIRVKKDLIKFENASEKLSKINGYTYMQKRGTDEDGNQKWEPNAGLIAQEVQAILPELVEGDPDGEALLRLNYNGVIGLNTAAINEHTAEIAELKSEIEELKKLVKSLLK
Physico‐chemical
properties
protein length:1102 AA
molecular weight: 118586,64980 Da
isoelectric point:5,66181
aromaticity:0,09528
hydropathy:-0,36443

Domains

Domains [InterPro]
DC_0538
STR
1–684
DC_0538 G3DSA:6.20.80.10 IPR030392
IPR048390
ATT
450–549
IPR048390 DC_0339 Coil
IPR030392
CHP
992–1051
IPR030392
DC_1381
RBD
1004–1102
DC_1381
XAO15127.1
1 1102
Architecture
STR
ATT
STR
RBD
STR 1-449 | ATT 450-549 | STR 550-1031 | RBD 1032-1102
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO15127.1
1 1102
Domain Start End Length (AA) Confidence
N-terminal 1 39 39 0,9118
Central domain 40 238 200 0,2486
C-terminal 239 1102 863 0,8015
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-39
Central
40-238
C-terminal
239-1102

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage FL18
[NCBI] 		3128055 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO15127.1 [NCBI]
Genbank nucleotide accession
PP400780.1 [NCBI]
CDS location
range 158338 -> 161646
strand -
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGAGCACGTCCTGCCGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGACCGTGTACTTTTTACTAAAGATGACCAAGGAAATATTATTGATCTGGGTTTTGCTAAAGGTGGTAGTATTGACGGGAATGTTATTCATACTGGCAATTATAACCAAACTGGCGATTATACTTTAAATGGCACCTTCACTCAGACAGGTAATTTTAATTTAACCGGTATTGCTCGAGTAACTCGTGATATTATTGCCGCTGGGCAGATTATGACCGAAGGCGGTGAACTTGTTACAAAAAGTTCAGGTACAGCACATGTTCGTTTTAATGATTCGGCTGATCGTGAACGTGGAATCATTTATGCCCCGGCTAATGATGGTTTAACTACACAAGTACTTAATATCAGGGTTCAAGACTACGCCGCCGGTAGCGAAAGCACTTATGCATTTTCAGGCAGTGGCCTATTTACTTCACCTGAAGTATCAGCATGGAAATCTATGTCAACTCCTCAGATTTTGACAAATAGAGTTATTACTAATAATAAATCTACGAGCGATTATGACATTTATTCTATGGCAGACAACGTTCCATTGGCTGAAAGCACTACGGCTATTAATCATCTCCGTGTTATGCGCAATGCTGTAGGCGCTGGCGTATTCCATGAAGTTAAAGATAATGATGGAATAACTTGGTATACTGGAGATGGCTTAGACACTTATCTTTGGTCGTTTACCTGGTCCGGTGGATTGAAAGCAGGCCATTCTATTTCTGTTGGTACTCCTGGTGGCAATAAAGGATACTCTGAATTAGGGACTGCTTCAATTTCTCTTGGCGATAATGATACCGGGCTAAAATGGCATCAGGACGGATATTATTTCAGCGTTAATAATGGAACAAAAACGTTTTTATTTAGTCCTAGCGAAACAACTAGCCTAAGAAAATTTGTAGCTGGATATTCTACTAACGGAACCGATTTAACTACTCCTCCAACTGAAAATTATGCTCTTGCTACTGTTGTGACATATCACGATAATAACGCGGTTGGAGATGGTCAGACTCTTTTAGGATATTATCAAGGCGGTAATTATCATCACTATTTCCGCGGTAAAGGTACTACAAACATTAATACCCATGGCGGTTTGTTAGTTACTCCCGGTGATGTAGATGTGGTCGGCGGTTCTGTTAATATCGATGGTAGAAATAATGCTTCTACACTGATGTTTAGAGGTAACACAACTGGTAGTAGTTCAGTTGATAATATGACAATTTCCGTTTGGGGCAATACGTTTACTAATCCTAGTGTAGGTAATCGTAAAAACGTCATGGAAATTTCTGATGCAACTAGTTGGATGAGCTATATTCAAAGACTTACAACAGGTGAAGTAGAAATGAACGTTAACGGTTCATTTGAATCATCTGGCGTTACTGCTGGAGATAGGGGAGTTCACACAACAGGCGAAATTTCATCTGGGGCTGTGAATGCGCTTCGTATTTGGAACGCAGATTATGGAGCTATTTTTAGACGTTCAGAAGGAAGTCTTCATATTATTCCAACTGCTTACGGTGAAGGTAAACACGGCGATATCGGTCCACTTCGCCCGTTTAGTATGGCTTTAGATACTGGTAAAGTTACTATTCCAGATTTACAATCAAGTTACAATACGTTCGCAGCAAACGGCTATATTAAATTTACTGGTCACGGTGCGGGAGCTGGCGGTTATGACATTCAATATGCTCAAGCGGCTCCTATTTTCCAGGAAATCGATGATGCTGTAAGCAAATATTATCCTATTGTTAAACAGAAGTTTTTAAACGGTAAATGCGTTTGGTCTTTAGGTACTGAAATTAATTCGGGTACATTTGTTTTACACCATATCAAAGAAGATGGATCACAAGGCCATACGTCTCGTTTTAATCAAGACGGTACTGTTAACTTCCCAGATAACGTTCAGGTCGGCGGCGGTGAAGCTACTATTGCTAGAAATGGTAATATTTTCTCGGATATTTGGAAATCGTTTACTTCAGCAGGAGACACTACAAATATCCGTGACGCTATTGCTACCCGTGTTTCTAAAGAAGGCGACACGATGACCGGCCGTTTAACTCTGAATACAAACTCGGATGCTATTGTTATTAACAGTGCGGCAACTGAATCTGGTTATGTGAAAGGACAAAAAGCAGGCGTTAATAACTGGTATGTGGGCAATGGCGGCGCTCATAACGCCCTATCGTTTTATAGTTTCCAAACTAATTCGGGTGTTAATATTCATAATAGCGGGGAAATTAGTTTAGCTCCTCAAGGGTCGGATACTTTTTATTTTAATAGGGACCGCCTTTATATAAAGGCTGCACAATGGTCGGCCCATCAATCCGGTGCATGGGGTGACCAATGGGGCTTAGAAGCTCCTGTATTTGTGGATTTTGGTAGTGTCAGTAATGACTGTTATTATCCTATTATTAAAGGAAGATCTGGTATTACGAATGAAGGATATTTTTCCGGCGTAGATTTTGGTATGCGCCGTGCCCCTAATATATGGGCACAAGGTATTATTCGTGTAGGTAATCAGGAAAATGGTTCCGGCCCACAAGCCATCTATGAATTTCACCACAATGGAGTTATGTATGTTCCTAACATGGTTAAAACCGGAGCAAGATTATCGGCTGGCGGTGGCGACCCAGTGTGGACTGGACCATGTCTTGTTATTGGTGATAATGATACAGGATTAGTTCATGGTGGTGACGGCCGAATCAATATGGTTGCCAATGGTATACATATTGCAAACTGGGGAGCAGGCTATCAATCTCATCCTGGGCTTTGGGATACAACTGGTGCTTTTTGGACAGAAACCGGAAGAGCTATCGTTTCTCATGGTCATTTAGTCCAACAGAGCGATGCCTATTCTACATATGTCCGCGATGTTTATGTTCGTTCTGATATTCGTGTTAAAAAGGATTTAATTAAATTTGAAAATGCTTCTGAGAAGCTTTCCAAAATTAATGGTTACACATATATGCAGAAACGTGGAACTGACGAAGATGGTAATCAGAAATGGGAACCAAACGCCGGTTTGATAGCTCAAGAAGTTCAAGCTATTTTGCCTGAATTAGTTGAAGGTGACCCTGATGGCGAAGCTTTACTTCGTTTGAACTATAACGGTGTAATTGGTTTAAATACAGCTGCAATCAATGAACATACTGCAGAAATTGCAGAACTTAAGTCAGAGATTGAAGAGCTTAAAAAATTAGTTAAATCATTGTTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c8863f125f83906342ca34f4ff3c963de5653ebc05e1ddb809478d96129a21f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5394
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Gp38 adhesins of Straboviridae phages target specific extracellular receptor loops Lutz,V.T., De Sousa,V.K., Taylor,N.M.I., Nugen,S.R., Gambino,M. and Brondsted,L. 2025-04-25 — GenBank