Protein

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Genbank accession
QBP32822.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPVGEIQISALPQASLPIDLSDIFHLKQGIEDKRCTLEQLLAPHASLRNNPHGVTKVHVELGNVVNALQLVAANNLSDVVSVEEARQNLNILSSDEVNALIQNHINDKNNPHNTNKIQVGLSNIQNWTYSNSYSEDADKYATAKAVNALYRAIQNSYPIGTIHLSVNPANPSTYLLCGGTWELVSKGRSLVGYDTDTRPVESVFGSATVTLTQNNIPSHTHSVLLTGGGHSHNATVVISSFDYGTKSTSSFDYGSKATNESGSHAHNVNGSVSSAGSHSHRIPLRGSDRGGVNAITATADAGVGNASYTDFDGVHTHTFNVNSSVGGNHSHSVYIGAHGHSVAIGSHGHSGTVTVQSSEHTHSGTTGAFGAGQAFNIEQPSYVVYVWKRTA
Physico‐chemical
properties
protein length:391 AA
molecular weight: 41383,81140 Da
isoelectric point:6,31404
aromaticity:0,06138
hydropathy:-0,31893

Domains

Domains [InterPro]
DC_1039
STR
1–391
DC_1039
IPR051934
Unmapped
110–359
IPR051934
IPR053827
ATT
154–270
IPR053827
QBP32822.1
1 391
Architecture
STR
ATT
STR
STR 1-153 | ATT 154-270 | STR 271-391
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage KPS64
[NCBI] 		2530184 Uroviricota > Caudoviricetes > Andersonviridae > Mooglevirus > Mooglevirus Sf17
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP32822.1 [NCBI]
Genbank nucleotide accession
MK562502.1 [NCBI]
CDS location
range 39119 -> 40294
strand -
CDS
ATGCCAGTCGGTGAAATTCAAATTAGTGCATTACCTCAAGCCTCGTTGCCTATTGATTTAAGTGATATCTTTCACCTTAAGCAAGGTATTGAGGATAAACGATGCACACTTGAGCAATTACTTGCTCCACACGCATCTTTAAGAAATAACCCACACGGTGTTACAAAGGTTCACGTAGAACTTGGTAATGTTGTTAACGCACTCCAATTAGTGGCTGCTAATAACTTGTCAGACGTGGTTAGTGTTGAAGAGGCTAGGCAGAACCTTAATATTCTATCAAGTGATGAAGTTAATGCTCTTATCCAGAATCACATTAATGACAAGAATAACCCTCACAACACTAACAAGATTCAAGTAGGTTTGTCTAATATTCAAAACTGGACATATTCAAACTCTTACTCTGAAGATGCTGATAAGTATGCTACTGCAAAAGCTGTGAATGCTTTATACAGGGCTATCCAGAATAGCTATCCGATTGGTACTATTCATTTGTCAGTTAACCCTGCAAACCCATCTACATATTTACTTTGTGGTGGTACTTGGGAGTTAGTTTCTAAAGGAAGGTCTCTTGTCGGTTATGACACAGATACAAGACCTGTAGAATCAGTATTTGGTTCTGCTACTGTAACACTTACACAAAATAACATTCCAAGCCACACACACTCTGTATTGTTAACTGGTGGTGGACACTCCCATAATGCAACAGTAGTAATTTCTAGCTTTGACTATGGGACTAAGAGCACATCAAGTTTTGATTACGGTTCTAAGGCCACAAACGAATCTGGAAGCCACGCTCATAACGTTAATGGTTCTGTAAGCAGTGCTGGTAGTCACAGCCACAGGATTCCATTGAGGGGTTCTGACAGGGGTGGTGTGAATGCTATTACGGCAACGGCTGATGCAGGTGTTGGGAATGCGTCATATACAGACTTTGATGGGGTTCACACACATACCTTCAATGTTAACTCTTCAGTTGGTGGTAACCACTCTCACAGTGTGTATATCGGAGCACATGGACACAGCGTTGCAATTGGTTCACATGGACACTCAGGTACTGTGACAGTTCAATCTTCTGAGCACACTCACTCAGGTACAACTGGTGCATTTGGTGCTGGACAAGCATTTAATATTGAGCAACCTTCTTATGTTGTATATGTTTGGAAGAGAACTGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
97556c91430e447b97a4fd596ec3547d8d2609f98274bfe44a9d4f5ff31dacf0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7161
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A cornucopia of Shigella phages from the Cornhusker state Doore,S.M., Schrad,J.R., Perrett,H.R., Dover,J.A., Schrad,K.P., Dean,W.F. and Parent,K.N. 2019 31569014 GenBank