Protein

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Genbank accession
QLI47607.1 [GenBank]
Protein name
putative tail protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MKGYSFGELVKLAEAAVPATRKVNGKPLTADITLNAADVKAAPNGFGLGEAIPGALGGSLDKYRHNGWRTYNAEAGDTGAPDAYGTCLDFGHIENAASFQGWAGQLFLANTGEMFGRVNANPGSFNGSEWFKFFTTATPPTAADTNAVPITRKINGKSLNKDVTLLAADVGAFAVGRIENGVHDLNNLVGPAYFGQYEVMGGGTPNWPWNNVDGGSLRIEGVNVYTKQIATRVLTGETMERVCDHSGNWTKWELVYTSRSFAKWDDYASKCPETMQNTVGCLSWNQFGNSHVIFDASAGRDPRGTTIDAVNPQEPWVSSHPTLMGWNGLRTYGLRVDVARRSESVHAAAGEKGAIDLPERASIRYRDGDSAWMHQYADAGKGIVWGHGEAGESYMASLSDNGVYEAATRLQARGSQSRTWGGIGVATVHNASAVVSEGNLQGLITGRYHFPGVYDWETGYGTVHSTDGPSHVFFTSNASNPGPALGLWEMTFGGALKSPGFSISKDGDVYGPVWGGWLSSYLSNGFAAKSHSHDYAPSVHSHTAAQGNHDIVTGDHRSVGAYAMLGRFNSGGQISPGQTIPGNQLLYTNAEGVLVGEAPPGTWKALGYSKGDRDYGVWNVTLFIRVA
Physico‐chemical
properties
protein length:627 AA
molecular weight: 66912,26280 Da
isoelectric point:6,01876
aromaticity:0,10686
hydropathy:-0,33939

Domains

Domains [InterPro]
DC_1150
STR
44–498
DC_1150 G3DSA:6.20.70.20
DC_1924
RBD
461–627
DC_1924
QLI47607.1
1 627
Architecture
STR
RBD
STR 44-498 | RBD 499-627
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLI47607.1
1 627
Domain Start End Length (AA) Confidence
N-terminal 1 37 37 0,9705
Central domain 38 236 200 0,1437
C-terminal 237 627 390 0,8128
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-37
Central
38-236
C-terminal
237-627

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage PVN02
[NCBI] 		2742446 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLI47607.1 [NCBI]
Genbank nucleotide accession
MT623578 [NCBI]
CDS location
range 5867 -> 7750
strand +
CDS
ATGAAAGGCTACTCTTTTGGAGAGCTAGTAAAACTGGCGGAAGCCGCGGTGCCAGCGACTCGCAAAGTCAACGGTAAGCCACTAACTGCTGATATCACGCTTAATGCCGCTGATGTTAAAGCTGCTCCTAATGGTTTTGGCCTTGGCGAGGCCATCCCCGGCGCCTTGGGTGGAAGTCTTGACAAGTATCGCCATAACGGATGGAGAACCTACAACGCTGAAGCAGGCGACACAGGCGCCCCTGATGCGTACGGTACCTGTTTGGACTTTGGTCACATTGAAAACGCCGCGAGTTTTCAGGGGTGGGCGGGTCAGCTGTTCCTGGCCAATACGGGGGAGATGTTCGGGCGCGTGAATGCGAACCCCGGCTCTTTTAATGGGTCTGAGTGGTTTAAGTTCTTTACTACCGCAACACCTCCAACAGCAGCTGACACAAATGCTGTCCCAATAACTCGGAAGATCAACGGCAAGTCTCTAAACAAGGACGTAACACTGCTAGCCGCCGACGTTGGGGCCTTTGCTGTTGGCCGCATTGAGAACGGGGTGCATGACCTTAATAATCTGGTTGGTCCGGCGTATTTTGGGCAGTACGAGGTAATGGGAGGTGGTACACCAAACTGGCCTTGGAATAATGTAGATGGCGGCTCTTTGCGCATTGAGGGCGTCAATGTTTACACCAAGCAGATTGCCACTCGTGTGCTGACTGGTGAGACCATGGAGCGCGTCTGCGACCATTCCGGCAATTGGACTAAGTGGGAGCTTGTTTACACGTCCCGCTCATTCGCCAAGTGGGATGATTACGCCTCCAAATGCCCGGAGACCATGCAAAACACTGTTGGCTGCCTGAGCTGGAACCAATTTGGTAATAGCCATGTGATCTTTGACGCCTCCGCCGGGCGCGACCCACGGGGTACGACAATTGATGCGGTGAACCCTCAAGAGCCTTGGGTCTCTAGTCACCCAACCCTTATGGGCTGGAATGGCTTGAGAACTTACGGCCTTCGTGTAGATGTCGCCCGCAGGTCTGAAAGTGTTCACGCCGCCGCTGGCGAAAAGGGGGCCATTGACCTCCCTGAGAGGGCCTCTATTCGCTATCGGGATGGGGATAGCGCATGGATGCACCAGTATGCAGATGCAGGAAAGGGTATTGTGTGGGGTCATGGGGAGGCTGGCGAATCGTATATGGCCTCCCTTAGCGACAATGGGGTGTATGAGGCCGCAACCCGCCTACAGGCGCGAGGCAGTCAGTCTCGCACATGGGGCGGGATTGGTGTGGCTACAGTCCATAACGCCAGTGCGGTCGTGTCAGAGGGCAACTTGCAAGGCCTGATTACCGGGCGTTATCATTTTCCTGGCGTGTACGACTGGGAGACCGGATACGGCACAGTACATTCAACCGATGGCCCATCTCATGTTTTCTTTACCTCCAACGCCAGCAATCCCGGCCCGGCGCTGGGCCTATGGGAGATGACCTTTGGTGGCGCCCTGAAATCACCCGGCTTTTCCATTAGCAAGGATGGGGATGTATATGGCCCGGTTTGGGGTGGCTGGCTGAGCTCTTACCTCAGCAATGGCTTTGCCGCCAAGAGTCACAGCCACGACTATGCGCCAAGCGTTCATAGTCACACCGCCGCTCAGGGAAACCACGACATTGTTACTGGTGACCATCGGTCGGTCGGCGCATACGCGATGCTTGGACGATTTAATAGCGGCGGCCAGATTAGTCCAGGCCAAACCATTCCGGGTAACCAACTCCTCTACACCAACGCCGAAGGTGTCCTTGTCGGTGAGGCTCCACCGGGGACTTGGAAGGCGCTCGGGTACTCAAAAGGGGACCGGGATTATGGAGTTTGGAACGTAACACTTTTTATTCGTGTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b3272792541c88902d5e07a4119ef7afe5e66c587405fc0eb5ab7f47b98d1d96
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6403
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel lytic phage infecting Aeromonas hydrophila, an infectious agent in striped catfish Pangasianodon hypophthalmus Vinh,T.Q., Nguyen,T.-T., Xuan,T.T.T., Huyen,P.T., Nga,L.P., Dung,H.M., Oanh,D.T.H., Millard,A.D. and Hoang,H.A. 2020-09-04 — GenBank