Protein

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Genbank accession
QNO00561.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,76
Protein sequence
MNLTPNDMLKALASIGLDGIISAGLVSSAGVKPLRRNVAIYGDSRTANCSSGPLPNKITENYGYASWLGQYSEGRIFFEPAFNFGVGGNTSAQWAARVGDVIASPSDVVVCLISTNDRTADFTLAQTQQNIEGVVMKLKQAGKIVVFINETPRGGANALTAPRQAIHEQVRAWINSYLPKLGVRVVDVWDKMTDTAAVTVDGLHFNPVGANIVGQALAREIQDLFNSPVPLPRVTSAYDSATNPFGQINTNALLTGTTGTKGGSANTTGDVATGYTVAGSSWTGMTVVASKEVTSVGEAQVFKFSGTPTTSGALYTFEQVISLANAKLAANIKAVADIEFEMTGCLGVSLDFRFLDSGTFNSKCCDRYQDGFPMSPIKVSGVQETPTTAITAGCTEVKIRVAVYGSQNVPMSGTVKIKQLAAIAA
Physico‐chemical
properties
protein length:425 AA
molecular weight: 44676,14540 Da
isoelectric point:6,74272
aromaticity:0,07529
hydropathy:0,05859

Domains

Domains [InterPro]
DC_1569
STR
3–224
DC_1569
IPR051532
Unmapped
27–224
IPR051532
IPR036514
STR
31–223
IPR036514
SSF52266
STR
37–225
SSF52266
cd00229
ENZ
38–219
cd00229 DC_2015
IPR013830
ENZ
41–210
IPR013830
QNO00561.1
1 425
Architecture
STR
RBD
STR 3-225 | RBD 226-416 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPsa381
[NCBI] 		1460366 Uroviricota > Caudoviricetes > Vandenendeviridae > Otagovirus > Otagovirus psa381
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNO00561.1 [NCBI]
Genbank nucleotide accession
MT670421 [NCBI]
CDS location
range 28699 -> 29976
strand +
CDS
ATGAACCTTACTCCAAACGATATGCTGAAAGCTCTAGCCTCTATTGGCCTAGATGGTATTATCTCTGCTGGCCTTGTATCGAGTGCTGGCGTCAAGCCGCTGCGTCGTAACGTTGCCATCTATGGTGACAGTCGCACAGCAAACTGCTCTAGCGGCCCCCTCCCAAACAAGATCACAGAAAACTATGGCTACGCCTCTTGGCTCGGTCAATACTCTGAGGGTCGTATCTTCTTTGAACCAGCATTCAACTTTGGTGTAGGTGGAAACACTTCTGCTCAGTGGGCTGCTCGCGTTGGTGATGTAATCGCCTCTCCATCTGATGTTGTTGTTTGTCTTATCTCGACTAACGACCGCACTGCTGACTTCACACTTGCTCAAACTCAACAGAACATTGAAGGTGTTGTGATGAAGTTGAAACAGGCTGGTAAGATTGTTGTGTTCATCAACGAGACTCCACGCGGTGGTGCAAACGCCCTGACAGCTCCAAGACAAGCCATTCATGAACAAGTGAGAGCTTGGATCAACAGCTACCTTCCAAAGCTTGGTGTGCGTGTTGTGGACGTTTGGGACAAGATGACTGATACCGCTGCTGTCACTGTAGACGGTCTACACTTCAACCCAGTTGGTGCAAACATCGTCGGGCAAGCCCTTGCAAGAGAAATCCAAGACCTGTTCAACTCTCCAGTGCCCCTGCCTCGCGTTACAAGCGCGTATGACTCTGCTACCAACCCGTTTGGTCAGATCAACACGAACGCCCTTCTAACAGGCACCACAGGGACTAAGGGAGGCTCTGCCAACACAACAGGTGACGTAGCCACTGGTTACACCGTTGCTGGAAGCTCTTGGACTGGTATGACTGTTGTTGCTTCCAAAGAGGTCACATCTGTAGGTGAAGCTCAAGTGTTCAAGTTCAGTGGTACACCAACTACATCTGGTGCATTGTACACATTCGAACAAGTGATCAGCCTTGCTAACGCAAAGCTTGCAGCAAACATTAAAGCTGTTGCTGATATTGAATTCGAAATGACTGGATGCCTCGGCGTTAGTCTCGACTTCCGCTTCCTTGACTCTGGCACTTTCAACTCTAAGTGTTGTGACCGTTACCAAGATGGATTCCCAATGTCTCCAATCAAAGTGAGCGGTGTTCAAGAAACTCCAACTACAGCAATCACTGCTGGATGCACAGAAGTTAAAATTCGTGTTGCTGTCTACGGCAGCCAAAACGTTCCAATGAGTGGGACGGTAAAGATTAAACAACTCGCAGCAATCGCTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
464c3c8bb4971594ba627aa16b781939a1fb34d63274468f61006262b992a755
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8421
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank