Protein

View in Explore
Genbank accession
QSM01325.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNSFLKAILNTPTLTIRDDVTKLPVWKSLQVKKVEIYSPASVVSKPLATKDQTEAQVYTEALDIDVKNGKIIQPVRLRINAICPDLSTVESIMNAFNDNTSTFAITSKSILADKMAIMTLDVDQSPDMLNAAEINMEFEQVEPPVLNEFDPAFPQDRPTYGVQVQSLSDANLLDLGAIGDSISSAAKSLYNRVTSYF
Physico‐chemical
properties
protein length:197 AA
molecular weight: 21690,49590 Da
isoelectric point:4,54299
aromaticity:0,06599
hydropathy:-0,07868

Domains

Domains [InterPro]
IPR054442
ATT
3–194
IPR054442
QSM01325.1
1 197
Architecture
ATT
ATT 3-194 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_V523
[NCBI] 		2813168 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSM01325.1 [NCBI]
Genbank nucleotide accession
MW595220.1 [NCBI]
CDS location
range 23117 -> 23710
strand +
CDS
TTGAACTCGTTCCTAAAGGCTATTCTCAACACGCCTACTCTCACCATTCGCGATGACGTGACCAAGCTTCCTGTCTGGAAGAGCCTTCAAGTCAAGAAAGTGGAAATTTACTCGCCGGCTTCCGTAGTGTCGAAACCTTTGGCGACGAAAGACCAGACGGAAGCTCAGGTGTACACCGAAGCTCTGGACATAGATGTGAAGAATGGAAAGATCATCCAGCCGGTGCGGCTCCGCATCAATGCTATCTGTCCGGACCTGTCCACCGTTGAAAGCATCATGAACGCTTTCAATGATAACACCTCGACTTTCGCTATCACTTCCAAGTCGATATTGGCCGATAAAATGGCCATCATGACGCTCGATGTAGATCAGTCTCCGGACATGTTGAACGCGGCTGAGATCAACATGGAATTCGAGCAGGTTGAGCCTCCAGTATTGAATGAATTCGACCCGGCTTTCCCTCAGGATAGGCCGACTTATGGGGTGCAGGTTCAATCTCTTTCTGATGCTAATTTGCTGGATTTGGGCGCCATCGGCGATTCGATATCCTCGGCCGCAAAATCGCTATATAATCGCGTGACCAGCTACTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6b3681994adc1c9242b52dd245d9fd94dcde7d4dbd7db1a671d5f5ae9ffd9c38
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6249
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage control of Pseudomonas aeruginosa in water Kauppinen,A., Siponen,S., Pitkanen,T., Holmfeldt,K., Pursiainen,A., Torvinen,E. and Miettinen,I.T. 2021-05-17 — GenBank