Protein

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Genbank accession
YP_007673769.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,68
Protein sequence
MSTLNVTDVNAGKVNISSGGLKLSSHNGSGNYPSAETGLLIYDSNAGGVKLYNGSAWDDVGGGELESGTRSTRPSSPGPANLRYNTQDGQHEYYFNNPMSNMSDALWVPMGGRQLVAFEERSDQWSSVDIKWGPGNGMSTSQGGMYHSYEIVMNFYEQNSGNGEYYVRFIDANGNVDTNGGRYFYMVSGWHANDGRPRAASGTGGRSYFAITSQNGSYQLQSNGESSYTSHIYMSNTPNSSTANYWSYYMYGAGGTEQAGGEYRGGGTWRGASQKNGTGYPLGGFRIYNNQNQRAVSQGCNFACAVYATMPSIRDYNIAGSYVNY
Physico‐chemical
properties
protein length:325 AA
molecular weight: 35209,64870 Da
isoelectric point:5,72934
aromaticity:0,13231
hydropathy:-0,71169

Domains

Domains [InterPro]
DC_1884
STR
1–66
DC_1884
YP_007673769.1
1 325
Architecture
STR
STR 1-66 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage MED4-213
[NCBI] 		889956 Uroviricota > Caudoviricetes > Eurybiavirus >
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007673769.1 [NCBI]
Genbank nucleotide accession
NC_020845 [NCBI]
CDS location
range 22450 -> 23427
strand -
CDS
ATGTCTACTCTTAATGTTACTGATGTAAATGCAGGAAAAGTTAATATTTCCTCTGGTGGTTTAAAACTGTCTTCCCATAATGGATCAGGCAATTACCCATCAGCTGAGACTGGTCTTTTAATTTATGACAGCAATGCAGGGGGAGTAAAATTATATAACGGTTCTGCTTGGGATGATGTAGGTGGTGGAGAATTAGAATCTGGCACTAGATCTACTAGACCTAGTAGTCCTGGTCCTGCAAATCTTAGATATAATACACAAGACGGTCAGCACGAATATTACTTTAACAACCCAATGTCAAACATGAGTGACGCACTTTGGGTTCCTATGGGTGGAAGACAACTAGTTGCTTTTGAAGAAAGAAGCGATCAGTGGAGTAGTGTTGATATTAAATGGGGTCCTGGTAACGGAATGTCCACATCTCAAGGTGGAATGTATCACTCATATGAAATTGTTATGAATTTCTATGAGCAAAACAGTGGTAACGGTGAATATTATGTTCGCTTTATTGATGCTAACGGTAACGTTGATACTAACGGTGGTAGATATTTCTACATGGTATCTGGATGGCACGCAAATGATGGTCGTCCTAGAGCAGCATCTGGAACTGGTGGTAGATCATATTTTGCTATTACTTCTCAGAACGGTAGTTATCAATTACAATCAAACGGTGAATCATCATATACTTCTCACATCTATATGAGTAACACACCAAACTCTAGTACTGCAAACTACTGGTCATACTACATGTATGGTGCAGGAGGAACAGAACAAGCGGGTGGTGAATATCGTGGTGGAGGAACTTGGAGGGGTGCTTCTCAGAAAAACGGTACTGGATATCCTCTTGGCGGTTTCCGCATATATAATAACCAGAACCAAAGAGCTGTATCACAAGGTTGTAACTTTGCATGTGCAGTTTATGCTACAATGCCTTCTATAAGGGATTACAATATCGCAGGTAGTTACGTTAATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6bc4dc1cd6378e012a06ce5431a20ce9175ee7781fb5257e800c521c41ea7025
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6486
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage MED4-213 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank