Protein
View in Explore- Genbank accession
- UIU27917.1 [GenBank]
- Protein name
- hinge connector of long tail fiber, proximal connector
- RBP type
-
TSP
- Protein sequence
-
MEKFMAEFGQGYVQTPFLSESNSVRYKISIAGSCPLSTAGPHVKFQDNPVGNQTFNAGLHLRVFDPSTGALVDSKSYAFSTSNDTTSAAFVSFMNSLTNNRLVAILTSGKVNFPPEVVSWLRTAGTSAFPSDSILSRFDVSYAAFYTSSKRAIALEHVKLSNRKSTDDYQTILDVVFDSLEDVGATGFPKRTYESVEQFMSAVGGTNNEIARLPTSAAISKLSDYNLIPGDVLYLKAQLYADADLLALGTTNISIRFYNASNGYISSTQAEFTGQAGSWELKEDYVVVPENAVGFTIYAQRTAQAGQGGMRNLSFSEVSRNGGISKPAEFGVNGIRVNYICESASPPDIMVLPTQASSKTGKVFGQEFREV
- Physico‐chemical
properties -
protein length: 371 AA molecular weight: 40132,38800 Da isoelectric point: 5,38592 aromaticity: 0,10782 hydropathy: -0,14286
Domains
Domains [InterPro]
DC_0912
STR
1–371
STR
1–371
PS52031
LEC
22–192
LEC
22–192
IPR039477
STR
58–126
STR
58–126
1
371
Architecture
STR 1-371
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
371
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 160 | 160 | 0,4325 |
| Central domain | 161 | 360 | 201 | 0,3565 |
| C-terminal | 361 | 371 | 10 | 0,1808 |
Note: Constraints were applied during segmentation.
Fixed 23 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 23 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-160
1-160
Central
161-360
161-360
C-terminal
361-371
361-371
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage vB_EcoM_SA21RB [NCBI] |
2909739 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
UIU27917.1
[NCBI]
Genbank nucleotide accession
OL960580
[NCBI]
CDS location
range 151362 -> 152477
strand +
strand +
CDS
ATGGAAAAATTTATGGCAGAGTTTGGACAAGGATATGTCCAAACGCCATTTTTATCGGAAAGTAATTCAGTAAGATACAAAATAAGTATAGCGGGTTCTTGCCCGCTTTCTACTGCAGGACCACACGTTAAATTTCAGGATAATCCTGTCGGAAATCAAACATTTAATGCAGGTCTTCATCTAAGAGTTTTTGACCCTTCCACAGGAGCATTAGTTGATAGTAAGTCATATGCTTTTTCTACTTCAAACGATACTACATCGGCTGCTTTTGTTAGTTTCATGAATTCTTTGACGAATAACAGACTTGTTGCTATATTAACTAGCGGAAAGGTTAATTTTCCTCCTGAAGTAGTATCTTGGTTAAGAACCGCAGGAACGTCTGCTTTTCCATCTGATTCTATATTGTCAAGATTTGACGTATCATATGCTGCCTTTTATACTTCTTCTAAAAGAGCTATTGCATTAGAGCATGTTAAACTGAGTAACAGAAAAAGCACAGATGACTATCAAACTATTTTAGATGTTGTATTTGACAGTTTAGAAGACGTTGGAGCTACGGGATTTCCTAAAAGAACATACGAAAGCGTTGAGCAATTTATGTCAGCAGTCGGTGGAACTAATAACGAAATTGCACGTCTACCAACTTCAGCTGCCATAAGTAAATTATCTGACTATAATTTAATTCCTGGCGATGTTCTTTATCTCAAAGCACAGTTATATGCTGATGCCGATTTACTTGCGCTTGGAACTACAAATATATCTATCCGTTTTTATAACGCATCGAATGGATATATTTCCTCGACACAAGCTGAGTTTACCGGACAAGCTGGGTCTTGGGAATTAAAGGAAGATTATGTAGTTGTTCCAGAAAACGCTGTCGGATTTACGATATACGCACAGAGAACTGCGCAAGCTGGTCAAGGTGGCATGAGAAATTTAAGCTTTTCTGAGGTGTCAAGAAATGGAGGTATTTCGAAACCTGCTGAATTTGGCGTCAATGGCATTCGTGTTAATTATATCTGTGAATCTGCTTCACCTCCGGATATAATGGTACTTCCTACGCAAGCATCGTCTAAAACTGGTAAAGTGTTTGGGCAAGAATTTAGAGAAGTTTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
acac06bdb056c5212872be66a72b8ea82c88ea2aae92db402b2b99b009f477e9
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50