Protein

View in Explore
Genbank accession
QBJ03765.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MFLLAKIGGFSDKNFTNAVKLAQTAQDAADKATASATASGAKLQQSLDGKITVSTVAPGNDDAAGHNKGDVWYVTSSDGSTYTEMYNFSGISWTQQQWDQQTLSVKYLSALSANLGNVQAGNINGVNISGSAITGGTITGSAIDQDFTSSDGNHYQLWADYNGFHYRVTRSSDGMVQDMRMTDSGFTVKGSGTVPTIIAGDSIVSNNITGTNVTAIMNLQGNNVSGSSVSGNGLSISGHTIACSDGGALYLERYGGGGTTTDIHAADVYSNGSKLKSALSAKRDISEYSLDEALSAVMNTDVKKWKYKDSDNSADSQHIGPIIDDVNEVGNKTASIANDMISTDENGNYYLNESNTISILLAALKKSNQRIDELSYRIAQLERKNIK
Physico‐chemical
properties
protein length:387 AA
molecular weight: 40943,43570 Da
isoelectric point:4,96218
aromaticity:0,06977
hydropathy:-0,37674

Domains

Domains [InterPro]
DC_1610
STR
5–387
DC_1610
IPR030392
CHP
277–378
IPR030392
IPR030392
CHP
281–330
IPR030392 Coil
QBJ03765.1
1 387
Architecture
STR
STR 5-387
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBJ03765.1
1 387
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,9884
Central domain 199 376 179 0,3857
C-terminal 377 387 10 0,9948
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-376
C-terminal
377-387

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage ATCCB
[NCBI] 		2510944 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus brevis
[NCBI] 		1580 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBJ03765.1 [NCBI]
Genbank nucleotide accession
MK504445.1 [NCBI]
CDS location
range 51297 -> 52460
strand -
CDS
ATGTTTTTGTTGGCAAAAATTGGTGGTTTTAGTGATAAAAATTTCACTAATGCAGTTAAACTTGCACAAACAGCTCAGGATGCTGCAGACAAGGCAACTGCAAGCGCCACAGCATCTGGTGCTAAATTGCAACAATCTCTTGATGGTAAAATTACTGTTTCTACAGTAGCCCCAGGTAATGATGATGCTGCAGGTCATAATAAAGGCGATGTTTGGTATGTAACAAGTTCTGATGGTTCAACATATACTGAAATGTATAATTTTTCAGGGATTAGTTGGACTCAACAACAATGGGACCAACAAACATTGTCCGTTAAATATCTGTCAGCCTTATCTGCCAACTTGGGTAACGTTCAAGCTGGGAATATAAATGGTGTAAATATCTCTGGTAGTGCTATCACAGGTGGCACTATTACTGGTAGTGCTATTGACCAAGACTTTACCTCGAGTGACGGCAATCATTACCAGTTGTGGGCTGATTATAATGGTTTCCATTATCGGGTAACAAGAAGTAGTGATGGCATGGTTCAGGATATGCGAATGACTGATAGTGGATTTACCGTAAAAGGGTCGGGAACAGTTCCAACAATTATTGCTGGGGATTCAATTGTTTCTAATAACATCACTGGGACAAATGTTACAGCCATTATGAATTTGCAAGGAAACAATGTCTCAGGTAGTTCTGTATCTGGTAATGGATTATCAATTAGTGGGCACACCATAGCCTGCAGTGATGGTGGTGCCTTATACCTTGAGCGTTATGGCGGTGGGGGAACTACTACAGATATACATGCCGCTGATGTTTATTCAAATGGAAGCAAGTTGAAGTCAGCTCTATCTGCTAAAAGGGACATATCTGAATATTCACTAGATGAAGCCCTGTCTGCTGTTATGAACACTGATGTTAAAAAATGGAAGTACAAGGATTCTGATAACTCTGCTGACTCCCAGCATATTGGTCCAATTATTGATGATGTTAATGAGGTTGGGAATAAAACTGCAAGTATTGCCAATGATATGATTAGCACTGATGAGAATGGTAATTACTATCTGAATGAGTCCAATACCATCTCCATCTTATTGGCGGCCTTGAAGAAGTCAAACCAGCGGATAGATGAACTCAGCTATCGAATTGCCCAATTAGAAAGGAAGAATATTAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d60998291b9756725221e4dd422d8fa2d152df913936d8ff03222ebc3bcad809
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7034
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of virulent Lactobacillus brevis phages Feyereisen,M., Mahony,J., O'Sullivan,T. and van Sinderen,D. 2019-04-26 — GenBank