Protein

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Genbank accession
WMC01258.1 [GenBank]
Protein name
major tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,53
Protein sequence
MANLGNSKIQIAGRGHVYYAVNDTEAPNLDGYVFGDGTTLEGNGWTWLGDTSSENLIEFESDGGDTSTKRTWDRQGVRSTREDVTNKVTINAVNLGEDVMKVAFPGSTYDAAKRAWDIELDASSERAILVVVEDGRIVSGYLFRRVSLAGNMPSLSLDNFTEVKIAGTLLSPSSGKTRVQMLEPRVVTGVGTAKPTIATLTPASGAVGAKVVIAGANFDGVREVKFGDKVASFEKDSATQITTYVPRGLNAGATNVVVTNNVAASDGKQFTVN
Physico‐chemical
properties
protein length:273 AA
molecular weight: 28931,93660 Da
isoelectric point:5,09183
aromaticity:0,06960
hydropathy:-0,19048

Domains

Domains [InterPro]
IPR058154
TAS
6–149
IPR058154 DC_1467 IPR013783
IPR014756
STR
194–272
IPR014756
IPR002909
RBD
195–271
IPR002909
WMC01258.1
1 273
Architecture
TAS
STR
TAS 6-149 | STR 150-273
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMC01258.1
1 273
Domain Start End Length (AA) Confidence
N-terminal 1 19 19 0,9141
Central domain 20 218 200 0,0527
C-terminal 219 273 54 0,5630
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-19
Central
20-218
C-terminal
219-273

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudovirus D_HF2_7
[NCBI] 		3071194 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMC01258.1 [NCBI]
Genbank nucleotide accession
OR148984 [NCBI]
CDS location
range 7221 -> 8042
strand +
CDS
ATGGCTAACCTCGGAAACAGCAAGATTCAGATCGCGGGCCGCGGTCACGTCTACTACGCCGTGAACGACACAGAGGCCCCAAACCTTGACGGCTACGTCTTCGGTGATGGCACCACCCTGGAGGGTAACGGGTGGACCTGGCTCGGTGACACCTCCTCGGAGAACCTCATCGAGTTTGAGTCCGACGGTGGCGACACCTCCACGAAGCGCACCTGGGACCGTCAGGGCGTCCGCTCCACGCGTGAGGATGTCACCAACAAGGTCACTATCAACGCCGTCAACCTCGGTGAGGACGTCATGAAGGTGGCCTTCCCTGGCTCCACCTATGACGCTGCGAAGCGCGCGTGGGACATTGAGCTCGACGCCTCCAGCGAGCGCGCCATCCTCGTTGTCGTGGAGGATGGCCGTATCGTCTCTGGCTACCTGTTCCGCCGTGTCTCCCTCGCCGGTAACATGCCCTCTCTGTCTCTGGACAACTTCACTGAGGTCAAGATTGCAGGCACCCTGCTCTCCCCGAGCTCCGGGAAGACTCGCGTGCAGATGCTGGAGCCTCGCGTTGTGACCGGCGTGGGTACTGCGAAGCCGACCATCGCTACCCTGACTCCTGCCTCTGGCGCGGTCGGCGCGAAGGTCGTCATCGCTGGCGCCAACTTCGATGGCGTCCGCGAGGTGAAGTTCGGAGACAAGGTGGCCTCCTTCGAGAAGGACTCCGCCACGCAGATCACCACCTACGTTCCTCGCGGCCTGAACGCTGGCGCTACGAACGTGGTCGTCACGAACAACGTTGCCGCCTCCGACGGCAAGCAGTTCACCGTCAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c632352860385b1d2d15281370ab73b7414a367e95144ad949fd880a5b442a2e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9148
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of diverse anelloviruses, cressdnaviruses, and phages in the human oral virome in North Carolina Paietta,E.N., Kraberger,S., Custer,J.M., Vargas,K.L., Epsy,C., Ehmke,E., Yoder,A.D. and Varsani,A. 2023-08-26 — GenBank