Protein

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Genbank accession
XRA40239.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MQQIKIEQVRADSTGNVVSEERGLAVKAADKDNTELRGSFDPNSGQLTISIPNIGTVNITGLPTIHDIGYGPAGIPGSAGRDGVDGLFGADGLRGSDGCEGPRGVQGRTGIQGPDGRRGNRGATGATGATGEQGIPGRVEVYVQEADPRLDNPNIGPGALWIRV
Physico‐chemical
properties
protein length:164 AA
molecular weight: 16797,31790 Da
isoelectric point:4,98327
aromaticity:0,03049
hydropathy:-0,48293

Domains

Domains [InterPro]
DC_0479
ATT
1–70
DC_0479 IPR008160
DC_0094
STR
62–151
DC_0094
XRA40239.1
1 164
Architecture
ATT
STR
ATT 1-70 | STR 71-151 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Sen-NF
[NCBI] 		3411927 No lineage information
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA40239.1 [NCBI]
Genbank nucleotide accession
PV359490.1 [NCBI]
CDS location
range 96118 -> 96612
strand +
CDS
ATGCAACAGATTAAAATTGAACAAGTTCGCGCTGATAGCACAGGTAATGTAGTCAGTGAGGAACGTGGTCTTGCAGTCAAAGCAGCAGACAAAGACAACACAGAACTGCGAGGATCGTTTGATCCAAATAGCGGACAACTAACGATCAGTATTCCAAATATCGGAACAGTGAACATCACAGGACTTCCTACTATCCATGATATCGGATACGGGCCTGCTGGTATTCCCGGCAGTGCTGGACGTGACGGTGTAGACGGATTGTTTGGTGCTGATGGGTTACGTGGGTCGGATGGATGTGAAGGCCCTCGCGGAGTTCAAGGACGTACTGGTATTCAAGGGCCTGACGGAAGACGTGGGAACCGAGGAGCAACTGGTGCTACAGGTGCAACAGGGGAACAAGGTATTCCAGGCCGGGTGGAAGTGTACGTTCAAGAAGCAGATCCGAGATTGGACAACCCTAACATTGGGCCAGGCGCGCTGTGGATCAGAGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
da7392dcb9d19c77a094656ee227a4580753f672a2eb110b5f498c73ab4e4e1d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7361
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50