Protein

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Genbank accession
QGK89665.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLELAINALSQFLSNVKPMKISVGQTIESLNCKIVEISEQQNYGLPTSPVDDGSYRGDTIYKMPLILNLRVYVKAEDIDNFLYGIKLGQFGEEMFEIYSLYDKVYKNMKIVSYARDTNASMLGATHYNIQMQEVILVKALVENYKNSKKAGYASKKDTGNKNPQEKPKSALFSSGKSLGAF
Physico‐chemical
properties
protein length:181 AA
molecular weight: 20305,13500 Da
isoelectric point:8,75186
aromaticity:0,09945
hydropathy:-0,30994

Domains

Domains [InterPro]
DC_0601
STR
5–181
DC_0601
IPR048494
ATT
35–139
IPR048494
QGK89665.1
1 181
Architecture
STR
ATT
STR
STR 5-34 | ATT 35-139 | STR 140-181
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage DA10
[NCBI] 		2656519 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni subsp. jejuni
[NCBI] 		32022 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Campylobacteraceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGK89665.1 [NCBI]
Genbank nucleotide accession
MN530981.1 [NCBI]
CDS location
range 5615 -> 6160
strand -
CDS
ATGTTAGAATTAGCAATTAACGCTTTAAGTCAATTTTTAAGTAATGTTAAGCCAATGAAAATTAGTGTAGGGCAGACAATAGAGAGTTTAAATTGTAAAATTGTTGAAATTTCAGAACAGCAAAACTATGGTTTGCCTACTTCCCCTGTTGATGATGGTAGTTATAGGGGTGATACTATTTATAAAATGCCTTTAATATTAAATTTAAGGGTTTATGTTAAAGCAGAAGATATTGATAATTTTCTTTATGGTATTAAATTGGGACAATTTGGTGAGGAAATGTTTGAAATTTACTCTTTATATGATAAGGTATATAAAAATATGAAAATAGTATCTTACGCACGAGATACTAATGCTAGTATGTTAGGTGCTACACATTATAATATACAAATGCAAGAAGTTATCCTAGTTAAAGCTTTAGTAGAAAATTACAAAAATTCTAAAAAAGCAGGATACGCTAGTAAAAAAGATACTGGTAATAAAAATCCGCAAGAAAAACCAAAGAGTGCTTTATTTTCAAGTGGTAAATCTTTAGGGGCGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3e9c5d1a180897c74a3f750bc0010943da713538b747aa7bd779e05200458762
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7994
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Campylobacter bacteriophage DA10 Hooton,S., D'Angelantonio,D., Connerton,P., Aprea,G. and Connerton,I. 2020-06-12 — GenBank