Protein

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UniProt accession
A0A7H0XC56 [UniProt]
Protein name
Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAKITKPVTTGIIHEGGLLSDYLKQAWDNTLHADNYFVSVKDFGAKGDGSADDTAAFKAALASGKNVYIPVGIYIISETLYFKNQVIKGGGIAPVPSLGTILATSHNEPAWKYDESAGYSMGGYLGGFFIDYGENKPDNYAGRKGIDLGDADQQAWPSQFIMENIIVRGAYFGLHDETGAFQYSMRNVVAINCWEGFRKFTGTTVLMDTCYALNCYQAYRLANVYNMTMNNCAMDGCNDIQGLQAFDITNCKGLVINGMYSENCEIHHSGNASIFIHGDSTVTINGYALHSHNVVVDPASGSEEAYFLRAHDSSRVNVDGIFFGENLKSTSIFTYPIMASGESRIKLGTTALKAWVGAKGGASMAAVGDSLIEYDNTVFNPSLTVGWCSNNGVVAKGTLVVNTTLEPNADLNAGTIQLVGDYKPNKGDVLTYGSTFDVQSCAIILKPQGDNSCNVYIKNLSAGSSVTLNGILHVQAIRR
Physico‐chemical
properties
protein length:479 AA
molecular weight: 51536,38740 Da
isoelectric point:5,35698
aromaticity:0,10230
hydropathy:-0,07432

Domains

Domains [InterPro]
IPR012334
STR
23–351
IPR012334
IPR011050
STR
34–406
IPR011050
IPR012334
STR
35–350
IPR012334
IPR024535
ENZ
37–91
IPR024535 DC_1130
A0A7H0XC56
1 479
Architecture
STR
RBD
STR 23-406 | RBD 407-479
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A7H0XC56
1 479
Domain Start End Length (AA) Confidence
N-terminal 1 51 51 0,9509
Central domain 52 379 329 0,9914
C-terminal 380 479 99 0,9816
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-51
Central
52-379
C-terminal
380-479

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Mt1B1_P10
[NCBI] 		2743960 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Vectrevirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0098994 symbiont entry into host cell via disruption of host cell envelope Biological Process IEA:UniProtKB-KW (UniProt)
GO:0098996 symbiont entry into host cell via disruption of host cell glycocalyx Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
2a4507da71e29da38bc0b1e472503aa81e073a7c5503f9fe5b049fad22723adf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8214
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50