Protein

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Genbank accession
AGH07725.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,59
Protein sequence
MADYLVTLNDPGSYNVGVDYEVPSKSIQYGNIIIGKTPAQDGTETTFNLNDQGSAYTPNNNQQLIVTKNGLFLDPSNDYNISGDKVVFTTPPAANDDVVIIALAAAADLTRTVNYVIDSGSLPMQPGDKGKLTIDVTGLIENIRVLSDQTGDIVLEIEKCTFADYPNFASITGGSRVQLTNSDKYFDDVLNNWTTTIGAGDILRFTVVSVNNIRRLLISLKLKL
Physico‐chemical
properties
protein length:224 AA
molecular weight: 24273,95760 Da
isoelectric point:4,34514
aromaticity:0,07589
hydropathy:-0,09777

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-SSM6a
[NCBI] 		682650 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH07725.1 [NCBI]
Genbank nucleotide accession
HQ317391 [NCBI]
CDS location
range 207418 -> 208092
strand +
CDS
ATGGCAGATTACTTAGTCACTCTCAACGATCCTGGCAGTTATAATGTCGGTGTAGACTATGAGGTTCCCTCAAAGTCGATCCAATATGGTAATATCATTATTGGAAAAACACCAGCACAAGATGGTACTGAAACCACATTTAATCTAAATGACCAAGGATCAGCATATACTCCTAACAATAATCAACAACTTATTGTTACTAAAAATGGTCTTTTCCTAGATCCGTCGAATGATTACAATATTTCTGGAGATAAAGTTGTATTTACAACTCCTCCAGCAGCAAATGATGACGTAGTGATCATTGCTCTTGCTGCAGCTGCTGATTTAACACGAACTGTAAACTATGTTATTGATAGCGGCAGTCTTCCAATGCAGCCTGGTGACAAAGGTAAACTTACCATAGATGTCACTGGACTTATCGAAAATATCAGAGTCTTGTCAGATCAGACTGGTGATATTGTTCTTGAAATAGAAAAATGCACTTTCGCAGATTATCCGAATTTCGCTAGTATTACTGGTGGTTCGAGAGTGCAACTAACCAATTCGGATAAATACTTTGATGATGTCCTAAATAATTGGACGACCACTATTGGAGCTGGAGATATTCTTCGTTTTACGGTGGTAAGTGTGAATAATATTAGAAGGTTACTAATCTCTCTAAAATTAAAATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
42e89c4008865e383dcf2c27b6d0bf5856f781c9e26325d1be339abc953dfe43
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8284
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage S-SSM6a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank