Protein

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Genbank accession
AXH70990.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAQTKKLARVFGKFREEYDISEVYSFLDEVRVSGDGVYRALKDVPLGTAPTDPEYWVKTVSDTKAVPAISSKGISRLGGNLSYNSSTGVLTIPRFRALFYDSSALLEIKTFLQTDVTIDPAIHNGITINASGVMAPVTVIDESETLVVSFSWAGETERPTIAELTANDFLPSKPLDMDVEYGLVVKLSDFGAKMGDPQSVEDACIRINKFMPDGSTVFIDGDYACKSTFLIENKSNFRMAYGRLFKDTLLWSGEYLVRFDSCVSPMLSNTGLKGLNGTSKNNNWGEQGLYFRACTSPVADGCFLESFGDAGLRAHSGGYDSATVPDAVSSFDVRVTACYFRYCYQNTMTPGGTNRQIWTDNVFIDSNGAAIKTASRMGEDAWGAIIANNIVLGYEEGEAFQVQGGKEMIIAGNVIRDVGISFMLSSNTDGTTDTYPTITKYGVIKIYGNIILGGRERFLFLQNRGMDLNDMDSNPIPGDLFMYDNYYEAHNSAAEGQPASYPAEAIRFFSHTYTGENSVKQRASIVRTCVIKNNTFKGGDHWMRNNCNIHGDSAVFIEDNKVLDYEGTFIDWTHEVDPDSTIGSPELHIKNNYANKCTKGVSLTLPTDSWPIERVEVRNNILPNLNQAGIVVGRDDMGFAMHVVVADNELAYPNGDDGSNHISVTCGNPSIAEGQPGENGTLKVKGNDIWDHTGTTSGRPIYVPSGARILSHMCHSNYAKGHTALSRSDNADIDTAALGVTVLT
Physico‐chemical
properties
protein length:744 AA
molecular weight: 81275,04200 Da
isoelectric point:4,93797
aromaticity:0,09543
hydropathy:-0,25121

Domains

Domains [InterPro]
IPR012334
STR
189–464
IPR012334
IPR011050
STR
216–491
IPR011050
AXH70990.1
1 744
Architecture
STR
STR 189-491 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH70990.1
1 744
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,9473
Central domain 199 721 524 0,9783
C-terminal 722 744 22 0,8424
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-721
C-terminal
722-744

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BONAISHI
[NCBI] 		2283011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio coralliilyticus
[NCBI] 		190893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH70990.1 [NCBI]
Genbank nucleotide accession
MH595538.1 [NCBI]
CDS location
range 242652 -> 244886
strand -
CDS
ATGGCACAAACAAAAAAGCTGGCCAGGGTTTTTGGTAAGTTCAGGGAAGAATATGACATTAGCGAGGTCTACAGTTTCCTTGACGAAGTACGAGTGTCCGGCGACGGCGTATATCGTGCATTAAAAGATGTACCTTTAGGTACAGCTCCCACGGACCCTGAGTACTGGGTGAAAACCGTATCGGATACAAAAGCAGTACCGGCGATTTCCAGTAAAGGTATTTCCAGACTAGGCGGTAATCTGTCATATAACTCATCGACAGGCGTACTGACCATTCCTCGTTTCCGGGCACTCTTTTATGATAGCAGTGCGCTACTTGAGATCAAAACCTTCTTGCAGACAGATGTTACAATAGATCCTGCAATCCATAACGGAATCACAATTAACGCATCTGGCGTTATGGCTCCGGTTACTGTCATTGACGAATCAGAGACATTAGTAGTCAGTTTCTCATGGGCAGGTGAAACCGAACGTCCAACAATAGCTGAATTAACAGCCAATGACTTCTTGCCGTCTAAGCCTCTGGATATGGATGTAGAATATGGCCTCGTAGTGAAGCTATCTGACTTTGGCGCTAAAATGGGTGATCCTCAGTCAGTAGAGGATGCTTGTATTCGCATCAATAAGTTTATGCCTGATGGCTCAACCGTATTCATCGATGGCGACTATGCATGCAAGTCTACCTTCTTAATTGAAAACAAGTCTAACTTCCGCATGGCCTATGGTCGTTTGTTTAAAGACACCCTATTGTGGAGCGGCGAATATCTAGTGCGCTTTGATAGCTGTGTGTCTCCGATGTTATCGAACACTGGTCTTAAAGGACTTAACGGAACCAGTAAGAATAATAACTGGGGTGAGCAGGGCCTTTACTTCCGTGCCTGTACGAGTCCTGTGGCTGATGGCTGTTTCCTAGAGTCATTCGGGGATGCCGGACTGCGTGCTCACTCAGGCGGTTATGATAGCGCTACAGTTCCTGATGCGGTTTCTTCATTTGACGTGCGCGTGACCGCCTGTTACTTCCGGTACTGTTATCAGAATACGATGACGCCTGGTGGTACTAACCGTCAAATCTGGACAGATAATGTCTTTATCGATTCTAACGGCGCAGCTATTAAAACAGCTTCTCGAATGGGTGAGGATGCGTGGGGTGCAATCATTGCCAATAACATCGTCCTTGGTTATGAAGAAGGCGAAGCATTCCAGGTGCAAGGCGGTAAAGAAATGATTATCGCTGGTAATGTTATCAGAGATGTAGGCATCTCGTTCATGTTATCGTCAAACACGGATGGTACTACCGATACCTATCCTACGATTACTAAATATGGAGTGATCAAGATCTATGGTAACATTATCTTAGGCGGTCGTGAACGATTCTTGTTCTTGCAGAACCGAGGCATGGATCTCAATGACATGGACTCTAATCCGATTCCTGGTGATCTGTTCATGTATGACAATTACTATGAAGCACATAACTCAGCTGCTGAAGGACAGCCTGCCAGTTACCCTGCTGAAGCAATTCGCTTCTTCTCGCATACATATACTGGTGAGAACTCTGTTAAGCAACGCGCAAGCATCGTTAGGACCTGTGTAATCAAGAACAATACTTTCAAAGGCGGCGATCACTGGATGCGTAACAACTGTAACATCCATGGTGATAGTGCGGTCTTCATCGAAGATAATAAGGTCTTAGATTATGAAGGTACCTTCATCGATTGGACGCATGAAGTAGATCCAGACTCTACTATCGGCTCTCCTGAGCTACATATCAAGAATAACTACGCCAACAAGTGCACTAAGGGCGTTAGTTTGACTTTGCCTACTGACAGCTGGCCTATTGAGCGAGTGGAAGTAAGAAACAACATCTTACCTAACTTAAACCAGGCAGGCATCGTTGTAGGCCGTGATGATATGGGCTTTGCAATGCATGTAGTTGTTGCGGATAACGAACTGGCTTATCCAAATGGCGATGATGGCTCTAACCACATTTCAGTAACCTGTGGTAACCCGTCCATTGCAGAAGGACAACCAGGTGAGAATGGTACCTTGAAGGTTAAAGGCAATGACATATGGGATCATACCGGTACTACGTCAGGGCGACCTATTTATGTGCCTTCAGGAGCTCGTATATTGAGTCATATGTGCCATAGTAACTATGCTAAGGGACATACTGCGCTTTCACGTTCCGATAACGCAGACATCGATACAGCGGCTCTAGGCGTTACTGTACTTACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b77d048787c7d0aa58329203a0e2ff7ac489bb2d787f3ce8ccac4c1f99d6ea42
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7232
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Therapeutic potential of a new jumbo phage that infects the coral pathogen Vibrio coralliilyticus Jacquemot,L., Bettarel,Y., Monjol,J., Corre,E., Halary,S., Desnues,C., Bouvier,T., Ferrier-Pages,C., Van Ngoc,B. and Baudoux,A.-C. 2018-10-24 — GenBank