Protein

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Genbank accession
YP_009189830.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MNILRSFTETVVTTPTDLFPISFEYDEKYDAVHVFLNDVAVEDLGYTVSQVNAVTLKVEPAIPEGTVRIERETDIDKMRYIFDAGALFIDQNVDADFRQIVHSQQEVRDGFIKLRNDVLPLVDGLEEALEAASEAGKAAEEAAQAAEEAANIALTNLRSTVSTIANLESLPTDDLYVGKCVYVVDLGCMYIYNGSSWDLSPVAHVTPDMFNGDIIEAANFAASHNLELHTGDTVYEVGVEFKVPKGLTWVANHTVIKQVAPAIDSSSASVLAPESNVTIKGYLILDMGAPTTGWGEKCHFRMDSFNNITPQVSNVQFDTLELRGGYFNCNGVVMAGGAKGLRGSCIKVGDSANIGRVFMAHWGNFTQHSYNRTTLKYTHVPNYSPTTHPNDCVIDSIYTGDLTCNTNDFSAIALISAGYNIHIGRIEGNVLDSTISGKGHYVATAGDLAFAYATPLERKRGMWGLTVDSIFGTTYSSAVCLISEALYRGADDLTNVVVPPTAADYDASIKLTIGDVDVTGRTAAVGNNYAVIARTGQFGKVKIESITTREFYSTFRIVDLCYNLEVGVMNCYDSKINPVTITGTTTLTRAPRGVHISTLNVWRYGVTSSSTTYRSVIQGDNFIDIVVDTLNVYEHGNAYCVVDIGGIITPPTTHIGEINVYDSTYPNTFLINNRSTMPIRLNSVYSTKPLVQVVSGGVVQTLLGKHIRYVSASVPTLSLNVGDEVLTNNGLLRCIAAGPASTTNLQLVEGGVDFAQDTIVLNPNTRHLLTSGRKLSYCKLALTSLRAAYSVSVDPTITFDVVMTADDTFSVYATNHNINTPYTLPSGRIYVQV
Physico‐chemical
properties
protein length:833 AA
molecular weight: 90417,84700 Da
isoelectric point:4,97474
aromaticity:0,08643
hydropathy:0,02353

Domains

Domains [InterPro]
DC_1044
STR
1–819
DC_1044
Coil
Unmapped
122–149
Coil
YP_009189830.1
1 833
Architecture
STR
STR 1-819 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009189830.1
1 833
Domain Start End Length (AA) Confidence
N-terminal 1 212 212 0,9946
Central domain 213 690 479 0,9945
C-terminal 691 833 142 0,9742
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-212
Central
213-690
C-terminal
691-833

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaP_PD-AB9
[NCBI] 		1701808 Uroviricota > Caudoviricetes > Autographivirales > Beijerinckvirinae > Friunavirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009189830.1 [NCBI]
Genbank nucleotide accession
NC_028679.1 [NCBI]
CDS location
range 4073 -> 6574
strand -
CDS
ATGAATATACTACGCTCATTTACAGAGACAGTGGTGACTACACCTACAGACCTTTTCCCTATCAGTTTTGAATATGATGAGAAATACGATGCTGTACATGTCTTTCTTAATGACGTAGCAGTAGAAGACTTGGGATACACAGTGTCTCAAGTTAATGCTGTTACTCTAAAAGTTGAACCTGCTATTCCAGAAGGTACAGTTCGTATTGAACGCGAAACAGATATTGATAAGATGCGGTACATCTTTGATGCTGGTGCGTTATTCATTGATCAGAATGTGGATGCAGATTTTCGACAGATCGTACACTCTCAGCAAGAGGTACGTGATGGTTTTATTAAATTACGTAATGACGTTCTACCACTTGTAGATGGTTTAGAGGAAGCTTTGGAGGCTGCTAGTGAAGCTGGGAAGGCTGCTGAGGAGGCTGCCCAAGCTGCTGAGGAGGCTGCTAATATAGCGTTGACGAACTTGCGCTCAACAGTATCTACTATAGCTAACTTAGAAAGTCTACCTACAGATGATTTATATGTGGGTAAATGTGTATACGTTGTAGATTTAGGATGTATGTATATCTACAACGGGAGCAGTTGGGATTTATCGCCAGTAGCACACGTAACTCCTGATATGTTTAATGGTGATATTATTGAAGCTGCTAACTTTGCAGCTAGTCACAATTTAGAATTGCATACAGGAGATACTGTTTATGAAGTAGGTGTTGAGTTTAAAGTACCTAAAGGTTTGACATGGGTAGCTAATCATACAGTGATTAAGCAAGTAGCCCCTGCTATTGATAGTAGTAGTGCGTCTGTATTAGCACCAGAAAGTAATGTTACTATCAAAGGTTATCTAATACTGGATATGGGCGCACCGACAACAGGTTGGGGTGAGAAATGCCATTTCCGCATGGATAGTTTTAATAACATAACCCCTCAAGTGAGTAATGTGCAGTTTGATACTTTAGAATTACGCGGTGGTTATTTTAACTGTAACGGTGTAGTAATGGCAGGTGGTGCAAAAGGTTTAAGAGGCTCATGTATTAAAGTAGGTGATAGTGCTAATATTGGACGTGTATTTATGGCTCATTGGGGTAACTTTACACAGCACTCCTATAACCGTACTACTTTAAAGTATACCCATGTACCTAACTACTCACCTACTACCCATCCTAATGACTGTGTGATCGATTCCATTTATACGGGCGATCTTACTTGTAATACTAACGATTTTAGTGCTATAGCATTAATATCCGCAGGTTACAATATACACATAGGGCGCATTGAAGGTAACGTTTTGGACAGCACTATTAGTGGTAAGGGGCACTACGTAGCTACGGCAGGTGATCTTGCATTTGCGTATGCTACTCCGTTAGAGCGTAAAAGAGGTATGTGGGGGCTTACTGTAGATTCCATATTTGGTACTACTTACTCTAGTGCCGTATGTTTAATTAGTGAGGCTTTATATAGAGGTGCAGATGACCTGACTAACGTGGTCGTACCACCTACAGCAGCAGACTATGATGCGTCTATTAAGCTAACTATAGGTGATGTAGATGTGACAGGGCGTACTGCTGCCGTAGGTAATAATTATGCCGTTATTGCGCGTACAGGGCAGTTTGGTAAAGTTAAGATTGAATCTATCACCACACGAGAGTTCTACTCTACGTTCCGTATTGTAGACTTGTGTTATAATCTTGAAGTAGGTGTTATGAATTGCTATGATTCTAAAATTAACCCTGTCACTATTACAGGTACTACTACTTTAACAAGAGCGCCTCGTGGTGTACACATATCAACTCTTAATGTGTGGCGTTACGGGGTTACTTCTAGTAGTACCACATACCGAAGTGTTATTCAAGGTGATAACTTCATTGATATTGTAGTAGATACACTTAACGTGTATGAGCACGGTAATGCTTACTGCGTAGTAGATATAGGCGGTATAATTACACCCCCTACTACACATATAGGGGAGATAAACGTATATGACTCAACATATCCAAATACTTTCCTAATCAACAACCGCAGCACCATGCCTATACGTTTAAATAGTGTATATTCTACTAAGCCCTTAGTTCAGGTGGTTAGTGGAGGTGTTGTGCAAACCTTGTTAGGTAAACACATACGTTATGTTAGTGCGAGTGTACCTACATTGAGTTTAAATGTGGGTGATGAGGTATTGACTAACAATGGGTTATTACGTTGTATCGCTGCTGGTCCTGCGTCAACGACTAACTTACAGTTAGTCGAAGGGGGTGTTGACTTTGCACAAGATACTATAGTTTTGAATCCAAATACAAGGCACTTGTTAACAAGTGGACGTAAACTAAGTTATTGTAAACTAGCTCTAACATCTTTAAGGGCTGCTTACAGTGTTAGTGTAGACCCTACAATAACGTTCGATGTAGTAATGACGGCAGATGACACTTTTAGTGTCTACGCCACTAATCACAACATAAATACACCATACACGTTACCTAGTGGTCGTATTTATGTGCAAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4905980b9a9b7044e30142753375c6504c93ecf0cd29ebe0ccc3c0cb03f08fd0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7428
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of an extensively-drug resistant Acinetobacter baumannii bacteriophage with broad host range Liu,Y., Guo,X., Tang,J., Liu,F., Fan,H., Yan,Y., Xu,Y. and Shi,Y. 2005-03 — GenBank