Protein

View in Explore
Genbank accession
CAB4197522.1 [GenBank]
Protein name
Phage tail collar domain containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MSLDDLVGGAFHSSKSDLSRGKVVQGAAAEGDPIVIILPEYSSEWAFDVPAPQYSPGLAEGDECLVIFDEEGDAWVINPALSGSGPEGPVGPAGPAGADGADGADGTNGTNGTNGSAASVTVGSTTTGSAGSSATVTNSGTTSAAILNFTIPRGDTGATGATGSVGAAGADGKSVLSGSGAPSSGLGTNGDFYLDTSASAIYGPKASGAWGSPVSLIGSAGTNGTNGTNGTNGTDGKSVLSGSGAPSAGLGTNGDFYIDTAANTIYGPKASGAWGSATSLVGPTGSAGATGAAGTNGTNGSAATIAVGTTTTGSAGSSAAVTNSGSSSAATFDFTIPRGDTGAGIAAGILVPFAGSSAPTGYLLCDGASVSTTTYATLFGVIGYTYGGSGASFTLPDLRGRMPIGAGTGTGLTARTLGANVGAEKTALAATDVPAHLHGVSITSGTESADHTHGVSITTGTESADHTHAVTGQGPSGSWITAATNTLTTGASGLTGWARGTLGTGGRSATHTHAVSGNTGNKSATHTHSVSGNTANSAAATTSPSVIPPAVVLNYLIKT
Physico‐chemical
properties
protein length:559 AA
molecular weight: 53040,63900 Da
isoelectric point:4,70282
aromaticity:0,05009
hydropathy:-0,01127

Domains

Domains [InterPro]
PTHR24637
Unmapped
84–302
PTHR24637 IPR037053
DC_1037
STR
107–212
DC_1037 SSF88874
IPR011083
ATT
348–403
IPR011083
CAB4197522.1
1 559
Architecture
STR
ATT
STR
STR 107-212 | ATT 339-403 | STR 404-558 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4197522.1 [NCBI]
Genbank nucleotide accession
LR797260 [NCBI]
CDS location
range 12855 -> 14534
strand +
CDS
ATGAGTCTCGACGATCTAGTTGGTGGCGCATTCCACTCGTCGAAGAGCGACCTGTCTCGCGGCAAGGTTGTGCAGGGTGCCGCAGCCGAGGGCGACCCGATCGTGATTATCCTTCCTGAGTATTCGTCGGAGTGGGCGTTTGACGTACCGGCTCCGCAGTACTCGCCGGGGCTGGCGGAGGGCGACGAGTGCTTGGTGATCTTCGACGAAGAAGGCGATGCGTGGGTGATCAACCCAGCGTTGAGTGGTTCTGGCCCGGAGGGTCCAGTCGGTCCAGCCGGTCCAGCAGGAGCAGATGGCGCAGATGGCGCGGACGGAACTAACGGTACGAATGGAACTAACGGTTCCGCCGCTTCGGTAACAGTTGGTTCAACAACGACTGGCAGCGCCGGGTCTTCGGCAACCGTCACGAACTCCGGCACTACGTCGGCTGCAATCCTGAACTTCACGATTCCTCGCGGAGATACCGGCGCGACCGGTGCGACGGGAAGTGTCGGCGCGGCTGGAGCAGACGGTAAGAGCGTGCTTAGTGGTTCTGGCGCTCCAAGCAGTGGACTTGGCACGAACGGTGATTTCTACCTCGACACGTCGGCGAGCGCTATCTATGGCCCGAAAGCGTCTGGTGCTTGGGGTTCGCCGGTATCTCTGATCGGTTCCGCTGGTACGAACGGGACAAACGGGACGAATGGGACGAACGGCACCGATGGCAAGTCAGTCCTGAGCGGGTCGGGCGCGCCGTCTGCTGGGCTTGGGACGAACGGCGATTTCTACATAGACACGGCTGCGAACACGATTTACGGTCCAAAGGCGAGCGGCGCTTGGGGTTCGGCAACAAGTTTGGTTGGTCCGACAGGCTCAGCCGGTGCGACTGGTGCAGCGGGAACTAATGGCACGAACGGGTCAGCGGCAACGATCGCCGTTGGGACAACGACAACTGGCAGCGCCGGATCTAGCGCTGCTGTCACGAACAGCGGCAGCAGCAGCGCGGCTACATTCGACTTCACAATCCCGCGTGGCGATACTGGAGCTGGCATCGCTGCTGGCATTCTCGTTCCGTTTGCTGGTTCAAGCGCTCCGACTGGGTATTTGCTTTGCGATGGCGCGAGCGTTTCAACGACTACTTACGCGACCTTGTTCGGTGTGATTGGGTACACGTATGGCGGAAGCGGCGCTAGTTTCACGCTTCCTGATCTACGCGGACGAATGCCGATTGGTGCTGGTACTGGTACTGGTTTGACGGCGAGAACGCTTGGAGCGAATGTTGGCGCTGAGAAGACCGCGCTCGCGGCGACTGACGTGCCAGCGCACTTACACGGCGTGAGCATCACGTCGGGTACGGAAAGCGCCGATCACACGCACGGCGTTTCTATTACGACCGGTACAGAAAGCGCCGATCACACGCACGCAGTCACCGGTCAGGGTCCGAGTGGTTCGTGGATCACCGCCGCAACGAACACGCTGACAACCGGCGCGTCGGGTCTAACTGGTTGGGCGCGAGGGACGCTTGGCACTGGCGGCAGGAGCGCAACGCATACGCACGCAGTCAGCGGCAACACGGGAAACAAGAGCGCAACGCACACTCACTCGGTAAGCGGCAACACCGCCAACAGCGCTGCGGCAACGACTTCGCCTTCGGTTATTCCGCCAGCGGTAGTCCTGAACTACCTGATCAAGACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
add878ea7653e966e149bcd03acb519fbf824fba009a52162bca9ff154a1c77d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7292
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50